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Protein Alignment Gga and Stam2

DIOPT Version :9

Sequence 1:	NP_572571.1	Gene:	Gga / 31902	FlyBaseID:	FBgn0030141	Length:	660	Species:	Drosophila melanogaster
Sequence 2:	NP_062641.1	Gene:	Stam2 / 56324	MGIID:	1929100	Length:	523	Species:	Mus musculus

Alignment Length:	533	Identity:	98/533 - (18%)
Similarity:	180/533 - (33%)	Gaps:	146/533 - (27%)

- Green bases have known domain annotations that are detailed below.

  Fly     9 EEMLERATNPAQKIDELGVQM-FCIVVKSNAQLVHKAQEMIVAKVRSTNVTEATRAISLLEECMT 72
            |:.:|:|||.....::..:.| .|..|.|.........:.|:.:|.......|.:|::||..|:.
Mouse    10 EQDVEKATNEYNTTEDWSLIMDICDRVGSTPSGAKDCLKAIMKRVNHKVPHVALQALTLLGACVA 74

  Fly    73 QCGDDFQDEASKFRFLNELIRLVSKKYKGAETPH-EVKQRIMECLLLWTTEF---PQRQKIRDAY 133
            .||..|..|.....|..|:..::..|      .| :|.:::...::.|:.||   ||...|....
Mouse    75 NCGKIFHLEVCSRDFATEVRSVIKNK------AHPKVCEKLKSLMVEWSEEFQKDPQFSLISATI 133

  Fly   134 DMLRKEG---DIEHGTTEAAVAKRESVLG-----------------------TIDEAMFAKLIKS 172
            ..:::||   ......|.||.||..:.|.                       |..:|::......
Mouse   134 KSMKEEGVTFPSAGSQTVAAAAKNGTSLNKNKEDEDIAKAIELSLQEQKQQYTETKALYPPAESQ 198

  Fly   173 NNPENFKRANLLLQYRMAQEARRNDLLAQHRLVLCEVQE-------------------------- 211
            .|.:..:|...|..:...::   |:|..:|..::..:.:
Mouse   199 LNNKAARRVRALYDFEAVED---NELTFKHGELITVLDDSDANWWQGENHRGTGLFPSNFVTTDL 260

  Fly   212 -------TMQLLN----------------------------QMLDTYDP-ANQDVSETLHELYKS 240
                   |:..||                            |:|.:.|| .::..|:.|.:|...
Mouse   261 STEVETATVDKLNVIDDDVEEIKKSEPEPVYIDEGKMDRALQILQSIDPKESKPDSQDLLDLEDV 325

  Fly   241 CKKHKPIFQHLPQLLDDSDAQLVADTLDANCALLATMQRY-KLLVPSPTRSTAAAL--------T 296
            |::..|:.....:.:|...::|    .:.|..:|..:..| ||:..:|..|..:.|        .
Mouse   326 CQQMGPMIDEKLEEIDRKHSEL----SELNVKVLEALDLYNKLVNEAPVYSVYSKLHPAHYPPAA 386

  Fly   297 TSAPTVASSVKSTASSTTA-----TTSSNNAQLLNELLGDLLIDGSNKAATTATTSLPNAAASGS 356
            ...|.....|:|...:...     .:.:.|..|..:.:|.|.....|..:.||.|..|...::|.
Mouse   387 AGVPVQTYPVQSHGGNYLGHGIHQVSVAQNYNLGPDPMGSLRSLPPNMNSVTAHTVQPPYLSTGQ 451

  Fly   357 NPLADLSDIFSSALAESEA--KQQSQP---------FQNATTLLEPQVISQGTTTEALANGNGGS 410
            :.:::.|.:..|:..::.|  ...:||         |||..:.| ||:              .|.
Mouse   452 DTVSNPSYMNQSSRLQAAAGTAAYTQPVGMSTDVSSFQNTASGL-PQL--------------AGF 501

  Fly   411 ASKVPETIRKMPQ 423
            ...||..:...||
Mouse   502 PVAVPAPVAAQPQ 514

Known Domains:

Indicated by green bases in alignment.

Software error:

Illegal division by zero at /www/www.flyrnai.org/docroot/cgi-bin/DRSC_prot_align.pl line 591.

For help, please send mail to the webmaster (ritg@hms.harvard.edu), giving this error message and the time and date of the error.