Protein Alignment Gga and stam2

DIOPT Version :9

• Sequence 1: NP_572571.1
• Gene: Gga / 31902
• FlyBaseID: FBgn0030141
• Length: 660
• Species: Drosophila melanogaster
• Sequence 2: NP_001007370.2
• Gene: stam2 / 492497
• ZFINID: ZDB-GENE-041114-64
• Length: 509
• Species: Danio rerio
• Alignment Length: 515
• Identity: 91/515 - (17%)
• Similarity: 165/515 - (32%)
• Gaps: 162/515 - (31%)

  Fly     9 EEMLERATNPAQKIDELGVQM-FCIVVKSNAQLVHKAQEMIVAKVRSTNVTEATRAISLLEECMT 72
            ::.:|:||:....:::.|:.| .|..|.:...........|:.:|.......|.:|::||..|:.
Zfish    10 DQDVEKATSETNTVEDWGLIMDICDRVGTAPNGAKDCLRSIMKRVNHKVPHVAMQALTLLGACVA 74

  Fly    73 QCGDDFQDEASKFRFLNELIRLVSKKYKGAETPHEVKQRIMECLLLWTTEF---PQRQKIRDAYD 134
            ..|..|..|.....|.:|:..::::.:.      :|.:::...:..|..:|   ||...|.....
Zfish    75 NSGKIFHLEICSREFASEVRGVLNRAHP------KVNEKLKALMAEWAEDFQKDPQLSLIGATIK 133

  Fly   135 MLRKEG------DIEHGTTEAAVAKRESVLGTIDEAMFAKLIK---------------------- 171
            .|::||      :.:..:|:.:.....|.....|:  .||.|:
Zfish   134 SLKEEGVTFPTANPQSSSTKPSSTPATSRASADDD--LAKAIELSLQEQKQQTETRPLTVIADPP 196

  Fly   172 --SNNPENFKRANLLLQYRMAQEARRNDLL--------------------AQHRLV--------- 205
              :|..:..::...|..:..|::   |:|.                    ..||.|
Zfish   197 YNTNGGKESRKVRALYDFEAAED---NELTFKAGELVIILDDSDPNWWKGENHRGVGLFPSNFVT 258

  Fly   206 ----------------------LCEV----------QETMQLLNQMLDTYDPAN--QDVSETLHE 236
                                  :.||          :|.|.....:|...|||:  .|..|.| .
Zfish   259 TNLNAEPDPVMYVEKTVVPEEPIVEVKAEPEPVYIDEEKMDKTLYLLQNTDPADATPDGPELL-T 322

  Fly   237 LYKSCKKHKPIFQHLPQLLDDSDAQLVADTLDANCALLATMQRYKLLV----------------- 284
            |..:|:|..|:.....|.:|...::|    .:.|..:|..::.|..|:
Zfish   323 LEDACEKMNPLIDEKLQEIDRKHSEL----SELNVKVLEALELYNQLMNEAPLYNAYSKMQSLQG 383

  Fly   285 ---------------PSPTRSTAA-----ALTTSAPTVAS---SVKSTASSTTATTS----SNNA 322
                           ||....:|.     :||..|..:.|   |:.|.|.|..|..|    ..||
Zfish   384 TYPAAPPHLSMQGYQPSGAYMSAGVPQGYSLTDQAGPLCSMPPSINSVAPSQPAQPSYISGPMNA 448

  Fly   323 QLLNELLGDLLIDGSNKAATTATTSLPNAAASGSNPLADLSDIFSSALAESEAKQQSQPF 382
            ..:|:..|     |..........::..:|...:||....:....||.|:...:||...|
Zfish   449 PYVNQAPG-----GPTPYPPQMGVAMDMSAYQNANPGLPPTSYPMSAPAQPAPQQQQAAF 503

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Gga	NP_572571.1	VHS_GGA	7..144	CDD:239624	28/144 (19%)
		GAT	210..284	CDD:281166	19/75 (25%)
		Alpha_adaptinC2	543..644	CDD:197886
stam2	NP_001007370.2	VHS_STAM	9..147	CDD:239625	28/142 (20%)
		SH3_STAM	206..259	CDD:212754	7/55 (13%)
		GAT	295..368	CDD:281166	20/77 (26%)
		Forkhead_N	366..479	CDD:254796	19/117 (16%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	1	0.930	-	-		C170574135
Domainoid	0	0.000	Not matched by this tool.
eggNOG	0	0.000	Not matched by this tool.
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	1	0.910	-	-
RoundUp	0	0.000	Not matched by this tool.
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	0	0.000	Not matched by this tool.
TreeFam	0	0.000	Not matched by this tool.
ZFIN	0	0.000	Not matched by this tool.
	2	1.840