Protein Alignment Gga and stam

DIOPT Version :10

• Sequence 1: NP_572571.1
• Gene: Gga / 31902
• FlyBaseID: FBgn0030141
• Length: 660
• Species: Drosophila melanogaster
• Sequence 2: NP_989237.1
• Gene: stam / 394846
• XenbaseID: XB-GENE-482429
• Length: 541
• Species: Xenopus tropicalis
• Alignment Length: 541
• Identity: 107/541 - (19%)
• Similarity: 190/541 - (35%)
• Gaps: 125/541 - (23%)

  Fly    12 LERATNPAQKIDELGVQM-FCIVVKSNAQLVHKAQEMIVAKVRSTNVTEATRAISLLEECMTQCG 75
            :|:||:.....::.|:.: .|..|..:..........|:.:|...:...|.:|::||..|::.||
 Frog    13 VEKATSELNTAEDWGLILDLCDKVGQSRTGPKDCLRSIMRRVNHKDPHVAMQALTLLGACVSNCG 77

  Fly    76 DDFQDEASKFRFLNELIRLVSKKYKGAETPHEVKQRIMECLLLWTTEF---PQRQKIRDAYDMLR 137
            ..|..|.....|.:|:..:::|.:.      :|.:::...::.|..||   ||...|......|:
 Frog    78 KIFHLEVCSRDFASEVSSVLNKGHP------KVCEKLKALMVEWADEFKNDPQLSLISAMIKNLK 136

  Fly   138 KEGDIEHGTTEAAVAKRESVLGTIDEAMFAKLIKSNNPENFKRANLLLQYRMAQEARRNDLLAQH 202
                 |.|.|..||..:.:     |:|..:..:.:.:|..           .|.:....||....
 Frog   137 -----EQGVTFPAVGSQAA-----DQAKASPALVAKDPGT-----------AATKKEEEDLAKAI 180

  Fly   203 RLVLCE--VQETMQLL---NQMLDTYDPANQDVSETLHELYKSCKKHKPIFQ--HLPQLLDDSDA 260
            .|.|.|  .|.|:..|   :.:|....|..:.| :.::: :::.:.::..|:  .:..:|||||.
 Frog   181 ELSLKEQKQQSTVSGLYPSSSLLSALKPEGRKV-QAIYD-FEAAEDNELTFKAGDIVTVLDDSDP 243

  Fly   261 QLVADTLDANCALLATMQRYKLLVPSPTRSTAAALTTSAPTVASSVKSTASSTTATTSSNNAQ-- 323
            .......:....|.            |:....|.||.....:.:..|:...|......:...:
 Frog   244 NWWKGETNEGIGLF------------PSNFVTADLTAELEMIKTEKKTVQFSDEVQVETIEPEPE 296

  Fly   324 --LLNELLGDLLIDGSNKAATTATTSLPN--------AAASGSNPLAD--LSDI----------- 365
              .::|...|.|:.....|  ..|..||:        ||.....||.|  |.||
 Frog   297 PVYIDEDKMDHLLQMLQSA--DPTDGLPDPTDLLHLEAACHQMGPLIDEKLEDIDRKHPELSELN 359

  Fly   366 ---------FSSALAESE-----AKQQSQPFQNATTLLEPQVISQGTTTEA--LANGNG--GSAS 412
                     ::..:.|..     ||.|:|.|...:..:.||...||....|  |..||.  |...
 Frog   360 VKVMEALSLYTKLMNEDPMYSMYAKMQNQQFYMQSAAVPPQQSYQGPHPNAAYLVTGNAQMGHIQ 424

  Fly   413 KVPETIRKMPQIDM------LSEELFQQILPTQDRMPSF-----KRDPEKITLNDLARERMHIKA 466
            ..|....::|.::.      .|.|     ||:|....|:     ...|..:.:|......:
 Frog   425 TYPIPTEQLPSLNQGAVPHPASNE-----LPSQSPQASYNTTVISSTPGNLYMNQATGHSL---- 480

  Fly   467 PEEPTTANDPASDSAPAIATA 487
                    :||:.:||...||
 Frog   481 --------NPAASAAPIDITA 493

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Gga	NP_572571.1	VHS_GGA_metazoan	8..144	CDD:340769	28/135 (21%)
		GAT_GGA_meta	201..283	CDD:410582	16/88 (18%)
		Alpha_adaptinC2	543..644	CDD:197886
stam	NP_989237.1	VHS_STAM1	9..139	CDD:340797	29/136 (21%)
		SH3_STAM1	211..265	CDD:212897	9/67 (13%)
		GAT_STAM1	299..375	CDD:410594	15/77 (19%)