DRSC/TRiP Functional Genomics Resources

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Protein Alignment Gga and Wdfy2

DIOPT Version :10

Sequence 1:NP_572571.1 Gene:Gga / 31902 FlyBaseID:FBgn0030141 Length:660 Species:Drosophila melanogaster
Sequence 2:NP_001402031.1 Gene:Wdfy2 / 305956 RGDID:1307337 Length:400 Species:Rattus norvegicus


Alignment Length:77 Identity:18/77 - (23%)
Similarity:29/77 - (37%) Gaps:14/77 - (18%)


- Green bases have known domain annotations that are detailed below.


  Fly   571 AQNKSRQPVRDFQFEASVKKPCKVRLLTPTDSQMPPHKPFRPAT--------PINQVMLLLNPTG 627
            :..:|..|:..|:||..|...|...:   ||.:..|...|..:.        ...:..||...|.
  Rat   326 SSKRSSIPLMGFEFEVRVCDSCHEAI---TDEERAPTATFHDSKHNIVHVHFDATRGWLLTAGTD 387

  Fly   628 KAV---DVTCIV 636
            |.:   |:|.:|
  Rat   388 KVIKLWDMTPVV 399

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
GgaNP_572571.1 VHS_GGA_metazoan 8..144 CDD:340769
GAT_GGA_meta 201..283 CDD:410582
Alpha_adaptinC2 543..644 CDD:197886 18/77 (23%)
Wdfy2NP_001402031.1 WD40 <16..272 CDD:441893
WD40 repeat 27..64 CDD:293791
WD40 repeat 72..132 CDD:293791
WD40 repeat 159..197 CDD:293791
WD40 repeat 203..240 CDD:293791
WD40 repeat 245..283 CDD:293791
FYVE_WDFY1_like 279..348 CDD:277258 6/21 (29%)
WD40 repeat 321..363 CDD:293791 10/39 (26%)
WD40 repeat 369..395 CDD:293791 4/25 (16%)
Blue background indicates that the domain is not in the aligned region.

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