Protein Alignment Gga and Gga1

DIOPT Version :9

• Sequence 1: NP_572571.1
• Gene: Gga / 31902
• FlyBaseID: FBgn0030141
• Length: 660
• Species: Drosophila melanogaster
• Sequence 2: XP_008763901.1
• Gene: Gga1 / 300066
• RGDID: 1307770
• Length: 635
• Species: Rattus norvegicus
• Alignment Length: 671
• Identity: 186/671 - (27%)
• Similarity: 309/671 - (46%)
• Gaps: 102/671 - (15%)

  Fly     8 MEEMLERATNPAQK-IDELGVQMFCIVVKSNAQLVHKAQEMIVAKVRSTNVTEATRAISLLEECM 71
            :|..:.|||||..| :|...:..||..:..:.:....|..::..|::|....||.:|:::||.||
  Rat    10 LEARINRATNPLNKELDWASINGFCEQLNEDFEGPPLATRLLAHKIQSPQEWEAIQALTVLETCM 74

  Fly    72 TQCGDDFQDEASKFRFLNELIRLVSKKYKGAETPHEVKQRIMECLLLWTTEFPQRQKIRDAYDML 136
            ..||..|.||..|||||||||::||.||.|:.|..:||.:|:|.|..||...|:..||.:||.||
  Rat    75 KSCGKRFHDEVGKFRFLNELIKVVSPKYLGSRTSEKVKNKILELLYSWTVGLPEEVKIAEAYQML 139

  Fly   137 RKEGDIEHG--TTEAAV-----AKRESVLGTIDE--AMFAKLIKSNNPENFKRANLLLQYRMAQE 192
            :|:|.::..  ..|.|:     .:.::|:...:|  .|.|:|:||::||:.:.||.|::..:.::
  Rat   140 KKQGIVKSDPKLPEDAIFPLPPPRPKNVIFEDEEKSKMLARLLKSSHPEDLRAANKLIKEMVQED 204

  Fly   193 ARRNDLLAQHRLVLCEVQETMQLLNQMLDTYD--PANQDVSETLHELYKSCKKHKPIFQHLPQLL 255
            .:|.:.:::....:.||...::||.:|:.::.  .|:....:.:.|||:.|::.:|....|....
  Rat   205 QKRMEKISKRVNAIEEVNNNVKLLTEMVMSHSQGAASSSSEDLMKELYQRCERMRPTLFRLASDT 269

  Fly   256 DDSDAQLVADTLDANCALLATMQRYKLLVPSPTRSTAAALTTSAPTVASSVKSTASSTTATTSSN 320
            :|:| :.:|:.|.||..|...:..||.||.....:..|               ||.|...:||:
  Rat   270 EDND-EALAEILQANDNLTQVINLYKQLVRGEELNGEA---------------TAGSIPGSTSA- 317

  Fly   321 NAQLLNELLG-DLLIDGSNKAATTATTSLPNAAASGSNPLADLSDIFSSALAESEAKQQSQP--- 381
                |.:|.| ||...|:...||.......|:....|..::.|.|...| |..|:....|.|
  Rat   318 ----LLDLSGLDLPSSGTTYPATPTRPGNQNSPEQLSASVSLLDDELMS-LGLSDPTPPSAPSSD 377

  Fly   382 ------FQNATTLLEPQVISQGTTTEALANGNGGSASKVPETIRKMPQIDMLSEELFQQILPTQD 440
                  ||::.. .||.|   ....:|....:...|...|.|...:..:|:|.:.|.||.||.:.
  Rat   378 SVGWNGFQSSDG-TEPSV---PPPAQAPCMDSRPPAQASPPTSSGLDDLDLLGKTLMQQALPPEA 438

  Fly   441 RMPSF-KRDP-EKITLNDL----------ARERMHIKAPEEPTTANDPASDSAPAIATATATVDS 493
            :...: |:.| .::||.||          |...:|..:||.|    .|...:.|...:.|...
  Rat   439 QQVRWEKQQPAPRLTLRDLQSKSSSPNPGATSLLHTTSPEPP----GPQPQAIPTELSLTNIT-- 497

  Fly   494 IDDVPLLSDDVEKKDEAVVAPVTVVPPAKPLSEINVELDNIQATGEQRIVLDDDDMQLSLNFTSD 558
               |||.|          :.|.:::|..                     |.|....::..:|..|
  Rat   498 ---VPLES----------IKPSSILPVT---------------------VYDQHGFRVLFHFARD 528

  Fly   559 -RPGHR-VSVIVISAQNKSRQPVRDFQFEASVKKPCKVRLLTPTDSQMPPHKPFRPATPINQVML 621
             .||.. |.|:|:|..:.:.||:|:..|:::|.|..||||..|:.:::|...|....:.|.||:|
  Rat   529 PLPGRSDVLVVVVSMLSTAPQPIRNIVFQSAVPKVMKVRLQPPSGTELPAFNPIVHPSAITQVLL 593

  Fly   622 LLNPTGKAVDVTCIVGYKLGD 642
            |.||..:.|.:...:.:.:||
  Rat   594 LANPQKEKVRLRYKLIFTMGD 614

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Gga	NP_572571.1	VHS_GGA	7..144	CDD:239624	56/136 (41%)
		GAT	210..284	CDD:281166	19/75 (25%)
		Alpha_adaptinC2	543..644	CDD:197886	33/102 (32%)
Gga1	XP_008763901.1	VHS_GGA	9..147	CDD:239624	56/136 (41%)
		DUF327	<180..234	CDD:294489	14/53 (26%)
		GAT_GGA1_GGA2	210..298	CDD:260097	22/88 (25%)
		Alpha_adaptinC2	513..627	CDD:197886	33/102 (32%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	1	0.930	-	-		C166334897
Domainoid	1	1.000	57	1.000	Domainoid score	I10606
eggNOG	1	0.900	-	-		E1_KOG1086
Hieranoid	1	1.000	-	-
Homologene	0	0.000	Not matched by this tool.
Inparanoid	1	1.050	171	1.000	Inparanoid score	I4016
OMA	1	1.010	-	-		QHG51934
OrthoDB	1	1.010	-	-		D376337at33208
OrthoFinder	1	1.000	-	-		FOG0001639
OrthoInspector	1	1.000	-	-		otm44916
orthoMCL	1	0.900	-	-		OOG6_106478
Panther	1	1.100	-	-	O	PTHR45905
Phylome	1	0.910	-	-
SonicParanoid	1	1.000	-	-		X1248
SwiftOrtho	1	1.000	-	-
TreeFam	0	0.000	Not matched by this tool.
	14	13.810