Protein Alignment Gga and Gga2

DIOPT Version :9

• Sequence 1: NP_572571.1
• Gene: Gga / 31902
• FlyBaseID: FBgn0030141
• Length: 660
• Species: Drosophila melanogaster
• Sequence 2: NP_001093989.1
• Gene: Gga2 / 293455
• RGDID: 1304800
• Length: 604
• Species: Rattus norvegicus
• Alignment Length: 660
• Identity: 164/660 - (24%)
• Similarity: 291/660 - (44%)
• Gaps: 126/660 - (19%)

  Fly     8 MEEMLERATNPAQ-KIDELGVQMFCIVVKSNAQLVHKAQEMIVAKVRSTNVTEATRAISLLEECM 71
            :|..|.:||||:. :.|...:|.||..|.::......|..::..|::|....||..|:::||.||
  Rat    29 LELWLNKATNPSMAEQDWSAIQKFCEQVNTDPSGPTHAPWLLAHKIQSPQEREALYALTVLEICM 93

  Fly    72 TQCGDDFQDEASKFRFLNELIRLVSKKYKGAETPHEVKQRIMECLLLWTTEFPQRQKIRDAYDML 136
            ..||:.|.:|.:|||||||||:::|.||.||....:||.|::|.|..||..||:..||||||.||
  Rat    94 NHCGEKFHNEVAKFRFLNELIKVLSPKYLGAWATEKVKGRVIEILFSWTVWFPEDIKIRDAYQML 158

  Fly   137 RKEGDIEHGTTEAAVAK--------RESVLGTIDE--AMFAKLIKSNNPENFKRANLLLQYRMAQ 191
            :|:|.|:. ..:..:.|        .:|:....:|  .:..:|:|||:||:.:.||.|::..:.:
  Rat   159 KKQGIIKQ-DPKLPMDKILPPPSPWPKSIFDADEEKSKLLTRLLKSNHPEDLQAANRLIKNLVKE 222

  Fly   192 EARRNDLLAQHRLVLCEVQETMQLLNQMLDTYDPANQDV--SETLHELYKSCKKHKP-IFQHLPQ 253
            |..:::.:::....:.||:..:::|.:||..|......:  .:.|..:|:.|:|.:| :|:....
  Rat   223 EQEKSEKVSRRVSAVEEVRSHVRVLREMLSMYRRPGHALPDQQALQVVYERCEKLRPTLFRLASD 287

  Fly   254 LLDDSDAQLVADTLDANCALLATMQRYKLLVPSPTRSTAAALTTSAPTVASSVKSTASSTTATTS 318
            ..||.||  :|:.|.||..|...:..||.:|.....:..|     .|....::.::....:....
  Rat   288 TTDDDDA--LAEILQANDLLTQGVLLYKQVVEGRVNAGNA-----VPAAVGAIPASRVFPSPEPC 345

  Fly   319 SNNAQLLN----ELL-GDLLIDGSNKAATTATTSLPNAAASGSNPLADLSDIFSSALAESEAKQQ 378
            ..|..|::    .|| .||...|.|...|.....:|:.                       .|.:
  Rat   346 GKNCPLIDLEAPSLLHQDLAALGINDVPTRNQVVIPSC-----------------------CKDK 387

  Fly   379 SQPFQNATTLLEPQVISQGTTTEALANGNGGSASKVPETIRKMPQIDMLSEELFQQILPTQDRMP 443
            .||  .|.||:                  ||.                     .|.:...::.:.
  Rat   388 KQP--GAITLM------------------GGG---------------------IQSLSADRNLLD 411

  Fly   444 SFKRDPEKITLNDLARERMHIKAPEEPTTANDPA-SDSAPAIATATATVDSIDDVPLLSDDVEKK 507
            .|...|....||.:.::.:..:.|  |.|...|. |..|..:|::.|:.::
  Rat   412 LFSPQPSPGPLNYVPQKSIPKEVP--PGTKASPGWSWEAGPLASSPASQNT-------------- 460

  Fly   508 DEAVVAPVTVVPPAKPLSEINVELDNIQATG-EQRIVLDDDDMQLSLNFT-SDRPGH-RVSVIVI 569
                           ||:.:.|.|::::.:. ...||.|.:..::.|:|: :..||| .|.|:::
  Rat   461 ---------------PLAHVFVPLESVKPSSLPPIIVYDRNGFRILLHFSQTGAPGHPDVQVLLL 510

  Fly   570 SAQNKSRQPVRDFQFEASVKKPCKVRLLTPTDSQMPPHKPFRPATPINQVMLLLNPTGKAVDVTC 634
            :..:.:.|||.|..|:.:|.|..:|:|...:.|::|...|..|...|:|::||.||..:.:.:..
  Rat   511 TMMSTATQPVWDVMFQVAVPKSMRVKLQPASSSKLPAFSPLTPPAVISQMLLLDNPHKEPIRLRY 575

  Fly   635 IVGYKLGDDP 644
            .:.:..|..|
  Rat   576 KLTFNQGGQP 585

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Gga	NP_572571.1	VHS_GGA	7..144	CDD:239624	59/136 (43%)
		GAT	210..284	CDD:281166	21/76 (28%)
		Alpha_adaptinC2	543..644	CDD:197886	29/102 (28%)
Gga2	NP_001093989.1	VHS_GGA	29..166	CDD:239624	59/136 (43%)
		ATP-synt_B	<186..>242	CDD:304375	13/55 (24%)
		GAT_SF	229..317	CDD:296121	23/89 (26%)
		Alpha_adaptinC2	482..596	CDD:197886	30/104 (29%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	1	0.930	-	-		C166334898
Domainoid	1	1.000	111	1.000	Domainoid score	I6100
eggNOG	1	0.900	-	-		E1_KOG1086
Hieranoid	1	1.000	-	-
Homologene	0	0.000	Not matched by this tool.
Inparanoid	1	1.050	171	1.000	Inparanoid score	I4016
OMA	1	1.010	-	-		QHG51934
OrthoDB	1	1.010	-	-		D376337at33208
OrthoFinder	1	1.000	-	-		FOG0001639
OrthoInspector	1	1.000	-	-		otm44916
orthoMCL	0	0.000	Not matched by this tool.
Panther	1	1.100	-	-	O	PTHR45905
Phylome	1	0.910	-	-
SonicParanoid	1	1.000	-	-		X1248
SwiftOrtho	1	1.000	-	-
TreeFam	1	0.960	-	-
	14	13.870