DRSC/TRiP Functional Genomics Resources

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Protein Alignment Gga and GGA1

DIOPT Version :9

Sequence 1:NP_572571.1 Gene:Gga / 31902 FlyBaseID:FBgn0030141 Length:660 Species:Drosophila melanogaster
Sequence 2:NP_001350700.1 Gene:GGA1 / 26088 HGNCID:17842 Length:656 Species:Homo sapiens


Alignment Length:687 Identity:189/687 - (27%)
Similarity:315/687 - (45%) Gaps:113/687 - (16%)


- Green bases have known domain annotations that are detailed below.


  Fly     8 MEEMLERATNPAQK-IDELGVQMFCIVVKSNAQLVHKAQEMIVAKVRSTNVTEATRAIS------ 65
            :|..:.|||||..| :|...:..||..:..:.:....|..::..|::|....||.:|::      
Human    10 LEARINRATNPLNKELDWASINGFCEQLNEDFEGPPLATRLLAHKIQSPQEWEAIQALTVRRGEA 74

  Fly    66 -----------LLEECMTQCGDDFQDEASKFRFLNELIRLVSKKYKGAETPHEVKQRIMECLLLW 119
                       :||.||..||..|.||..|||||||||::||.||.|:.|..:||.:|:|.|..|
Human    75 TIRPPPCDDTKVLETCMKSCGKRFHDEVGKFRFLNELIKVVSPKYLGSRTSEKVKNKILELLYSW 139

  Fly   120 TTEFPQRQKIRDAYDMLRKEGDI-------EHGTTEAAVAKRESVLGTIDE--AMFAKLIKSNNP 175
            |...|:..||.:||.||:|:|.:       :..|......:.::|:...:|  .|.|:|:||::|
Human   140 TVGLPEEVKIAEAYQMLKKQGIVKSDPKLPDDTTFPLPPPRPKNVIFEDEEKSKMLARLLKSSHP 204

  Fly   176 ENFKRANLLLQYRMAQEARRNDLLAQHRLVLCEVQETMQLLNQMLDTYD---PANQDVSETLHEL 237
            |:.:.||.|::..:.::.:|.:.:::....:.||...::||.:|:.::.   .|.....:.:.||
Human   205 EDLRAANKLIKEMVQEDQKRMEKISKRVNAIEEVNNNVKLLTEMVMSHSQGGAAAGSSEDLMKEL 269

  Fly   238 YKSCKKHKPIFQHLPQLLDDSDAQLVADTLDANCALLATMQRYKLLVPSPTRSTAAALTTSAPTV 302
            |:.|::.:|....|....:|:| :.:|:.|.||..|...:..||.||.....:..|         
Human   270 YQRCERMRPTLFRLASDTEDND-EALAEILQANDNLTQVINLYKQLVRGEEVNGDA--------- 324

  Fly   303 ASSVKSTASSTTATTSSNNAQLLNELLG-DLLIDGSNKAATT--ATTSLPNAAASGSNPLADLS- 363
                  ||.|...:||:     |.:|.| ||     ..|.||  |..:.|...||...|.|.:| 
Human   325 ------TAGSIPGSTSA-----LLDLSGLDL-----PPAGTTYPAMPTRPGEQASPEQPSASVSL 373

  Fly   364 -DIFSSALAESEAKQQSQPFQNATTLLEPQVISQGTTTEALANGNGGSASKVPETIRKMP----- 422
             |....:|..|:....|.|..:.|.....| .|..|...|.|.....|....|.....:|     
Human   374 LDDELMSLGLSDPTPPSGPSLDGTGWNSFQ-SSDATEPPAPALAQAPSMESRPPAQTSLPASSGL 437

  Fly   423 -QIDMLSEELFQQILPTQDRMPSF-KRDP-EKITLNDLARERMHIKAPEEPTTANDPASDSAPAI 484
             .:|:|.:.|.||.||.:.:...: |:.| .::||.||               .|..:|.|:|: 
Human   438 DDLDLLGKTLLQQSLPPESQQVRWEKQQPTPRLTLRDL---------------QNKSSSCSSPS- 486

  Fly   485 ATATATVDSIDDVPLLSDDVEKKDEAVVAPVTVVPPAKP------LSEINVELDNIQATGEQRI- 542
            ::||:.:.:                  |:|....||.:|      |:.|.|.|::|:.:....: 
Human   487 SSATSLLHT------------------VSPEPPRPPQQPVPTELSLASITVPLESIKPSNILPVT 533

  Fly   543 VLDDDDMQLSLNFTSD-RPGHR-VSVIVISAQNKSRQPVRDFQFEASVKKPCKVRLLTPTDSQMP 605
            |.|....::..:|..| .||.. |.|:|:|..:.:.||:|:..|:::|.|..||:|..|:.:::|
Human   534 VYDQHGFRILFHFARDPLPGRSDVLVVVVSMLSTAPQPIRNIVFQSAVPKVMKVKLQPPSGTELP 598

  Fly   606 PHKPFRPATPINQVMLLLNPTGKAVDVTCIVGYKLGD 642
            ...|....:.|.||:||.||..:.|.:...:.:.:||
Human   599 AFNPIVHPSAITQVLLLANPQKEKVRLRYKLTFTMGD 635

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
GgaNP_572571.1 VHS_GGA 7..144 CDD:239624 56/160 (35%)
GAT 210..284 CDD:281166 19/76 (25%)
Alpha_adaptinC2 543..644 CDD:197886 32/102 (31%)
GGA1NP_001350700.1 VHS_GGA 9..164 CDD:239624 56/153 (37%)
GAT_GGA1_GGA2 227..316 CDD:260097 22/89 (25%)
Alpha_adaptinC2 534..648 CDD:197886 32/102 (31%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C165141232
Domainoid 1 1.000 111 1.000 Domainoid score I6233
eggNOG 1 0.900 - - E1_KOG1086
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 205 1.000 Inparanoid score I3724
Isobase 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG51934
OrthoDB 1 1.010 - - D376337at33208
OrthoFinder 1 1.000 - - FOG0001639
OrthoInspector 1 1.000 - - otm40777
orthoMCL 1 0.900 - - OOG6_106478
Panther 1 1.100 - - O PTHR45905
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R2130
SonicParanoid 1 1.000 - - X1248
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
User_Submission 00.000 Not matched by this tool.
1514.800

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