DRSC/TRiP Functional Genomics Resources

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Protein Alignment Gga and GGA2

DIOPT Version :10

Sequence 1:NP_572571.1 Gene:Gga / 31902 FlyBaseID:FBgn0030141 Length:660 Species:Drosophila melanogaster
Sequence 2:NP_055859.1 Gene:GGA2 / 23062 HGNCID:16064 Length:613 Species:Homo sapiens


Alignment Length:667 Identity:168/667 - (25%)
Similarity:297/667 - (44%) Gaps:128/667 - (19%)


- Green bases have known domain annotations that are detailed below.


  Fly     8 MEEMLERATNPA-QKIDELGVQMFCIVVKSNAQLVHKAQEMIVAKVRSTNVTEATRAISLLEECM 71
            :|..|.:||:|: .:.|...:|.||..|.::......|..::..|::|....||..|:::||.||
Human    26 LELWLNKATDPSMSEQDWSAIQNFCEQVNTDPNGPTHAPWLLAHKIQSPQEKEALYALTVLEMCM 90

  Fly    72 TQCGDDFQDEASKFRFLNELIRLVSKKYKGAETPHEVKQRIMECLLLWTTEFPQRQKIRDAYDML 136
            ..||:.|..|.:|||||||||:::|.||.|:....:||.|::|.|..||..||:..||||||.||
Human    91 NHCGEKFHSEVAKFRFLNELIKVLSPKYLGSWATGKVKGRVIEILFSWTVWFPEDIKIRDAYQML 155

  Fly   137 RKEGDIEHGTTEAAVAK---------RESVLGTIDE--AMFAKLIKSNNPENFKRANLLLQYRMA 190
            :|:|.|:. ..:..|.|         :.|:....:|  .:..:|:|||:||:.:.||.|::..:.
Human   156 KKQGIIKQ-DPKLPVDKILPPPSPWPKSSIFDADEEKSKLLTRLLKSNHPEDLQAANRLIKNLVK 219

  Fly   191 QEARRNDLLAQHRLVLCEVQETMQLLNQMLDTY-----DPANQDVSETLHELYKSCKKHKP-IFQ 249
            :|..:::.:::....:.||:..:::|.:||..|     .|.:|   |.|..:|:.|:|.:| :|:
Human   220 EEQEKSEKVSKRVSAVEEVRSHVKVLQEMLSMYRRPGQAPPDQ---EALQVVYERCEKLRPTLFR 281

  Fly   250 HLPQLLDDSDAQLVADTLDANCALLATMQRYKLLVPSPTRSTAAALTTSAPTVASSVKSTASSTT 314
            ......||.||  :|:.|.||..|...:..||.::..  |.|.....||:               
Human   282 LASDTTDDDDA--LAEILQANDLLTQGVLLYKQVMEG--RVTFGNRVTSS--------------- 327

  Fly   315 ATTSSNNAQLLNELLGDLLID-------GSNKAATTATTSLPNAAASGSNPLADLSDIFSSALAE 372
                          |||:.:.       |..|........:.|..|.....:..|.....:||..
Human   328 --------------LGDIPVSRVFQNPAGCMKTCPLIDLEVDNGPAQMGTVVPSLLHQDLAALGI 378

  Fly   373 SEAKQQSQPFQNATTLLEPQVISQGTTTEALANGNGGSASKVPETIRKMPQIDMLSEELFQQILP 437
            |:|.        .|.::..|...:.....:.:...||.... |...|.:  :|:||.:       
Human   379 SDAP--------VTGMVSGQNCCEEKRNPSSSTLPGGGVQN-PSADRNL--LDLLSAQ------- 425

  Fly   438 TQDRMPSFKRDPEKITLNDLARERMHIKAPEEPTTANDPASDSAPAIATATATVDSIDDVPLLSD 502
                       |....||.::::.:..:.|        |.:.|:|..:.                
Human   426 -----------PAPCPLNYVSQKSVPKEVP--------PGTKSSPGWSW---------------- 455

  Fly   503 DVEKKDEAVVAPVTVVPPAK--PLSEINVELDNIQATG-EQRIVLDDDDMQLSLNFT-SDRPGH- 562
                  ||  .|:...|.::  ||:::.|.|::::.:. ...||.|.:..::.|:|: :..||| 
Human   456 ------EA--GPLAPSPSSQNTPLAQVFVPLESVKPSSLPPLIVYDRNGFRILLHFSQTGAPGHP 512

  Fly   563 RVSVIVISAQNKSRQPVRDFQFEASVKKPCKVRLLTPTDSQMPPHKPFRPATPINQVMLLLNPTG 627
            .|.|::::..:.:.|||.|..|:.:|.|..:|:|...:.|::|...|..|...|:|::||.||..
Human   513 EVQVLLLTMMSTAPQPVWDIMFQVAVPKSMRVKLQPASSSKLPAFSPLMPPAVISQMLLLDNPHK 577

  Fly   628 KAVDVTCIVGYKLGDDP 644
            :.:.:...:.:..|..|
Human   578 EPIRLRYKLTFNQGGQP 594

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
GgaNP_572571.1 VHS_GGA_metazoan 8..144 CDD:340769 57/136 (42%)
GAT_GGA_meta 201..283 CDD:410582 26/87 (30%)
Alpha_adaptinC2 543..644 CDD:197886 29/102 (28%)
GGA2NP_055859.1 VHS_GGA2 25..163 CDD:340807 57/136 (42%)
GGA_N-GAT 185..224 CDD:465702 11/38 (29%)
GAT_GGA1_GGA2 227..314 CDD:410586 26/91 (29%)
Unstructured hinge 316..483 40/258 (16%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 389..414 4/25 (16%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 435..466 8/62 (13%)
Alpha_adaptinC2 491..605 CDD:197886 30/104 (29%)

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