DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Gga and TOM1

DIOPT Version :9

Sequence 1:NP_572571.1 Gene:Gga / 31902 FlyBaseID:FBgn0030141 Length:660 Species:Drosophila melanogaster
Sequence 2:NP_001129204.1 Gene:TOM1 / 10043 HGNCID:11982 Length:493 Species:Homo sapiens


Alignment Length:548 Identity:105/548 - (19%)
Similarity:196/548 - (35%) Gaps:133/548 - (24%)


- Green bases have known domain annotations that are detailed below.


  Fly    10 EMLERATNPAQKIDELGVQM-FCIVVKSNAQLVHKAQEMIVAK-VRSTNVTEATRAISLLEECMT 72
            :.:|:||:.:.:.::..:.| .|.::....:....|...:..: |.:.|..|...|:::||.|:.
Human    15 QRIEKATDGSLQSEDWALNMEICDIINETEEGPKDALRAVKKRIVGNKNFHEVMLALTVLETCVK 79

  Fly    73 QCGDDFQDEASKFRFLNE-LIRLVSKKYKGAETPHEVKQRIMECLLLWTTEF---PQRQKIRDAY 133
            .||..|....:...|:.. |:|.:..|   ...|..|..:::..:..|...|   |....:...|
Human    80 NCGHRFHVLVASQDFVESVLVRTILPK---NNPPTIVHDKVLNLIQSWADAFRSSPDLTGVVTIY 141

  Fly   134 DMLRKEGDIEHGTTEAAVAKRESVLGTIDEAMFAKLIKSNNPENFKRANLLLQYRMAQEARRNDL 198
            :.||::| :|...|:..:.   |.:.|....:|....:|.            |..:..::.:.:.
Human   142 EDLRRKG-LEFPMTDLDML---SPIHTPQRTVFNSETQSG------------QDSVGTDSSQQED 190

  Fly   199 LAQH--------------------------RLVLCEVQETMQLLNQMLDTYDPANQDVS--ETLH 235
            ..||                          |..|..|...::::::||....|...:.:  |.|.
Human   191 SGQHAAPLPAPPILSGDTPIAPTPEQIGKLRSELEMVSGNVRVMSEMLTELVPTQAEPADLELLQ 255

  Fly   236 ELYKSCK-KHKPIFQHLPQLLDDSDAQLVADTLDANCALLATMQRYKLLVPSPTRSTAAALTTSA 299
            ||.::|: ..:.:.:.:||:.::   ||..:.|..|..|.....|::......|     ..||.|
Human   256 ELNRTCRAMQQRVLELIPQIANE---QLTEELLIVNDNLNNVFLRHERFERFRT-----GQTTKA 312

  Fly   300 PTVASSVKS--TASSTTATTSSNNAQLLNELLGDLLIDGSNKAATTATTSLPNAAASGSNPLADL 362
            |:.|.....  ......|.|.:.::||.          |.|..:::....|.:..|||.  |.|.
Human   313 PSEAEPAADLIDMGPDPAATGNLSSQLA----------GMNLGSSSVRAGLQSLEASGR--LEDE 365

  Fly   363 SDIFS----SALAES-------------------EAKQQSQPFQNATTLLEPQVISQGTTTEALA 404
            .|:|:    |:||:.                   :|:|||......|.....:.|.|..:|:.  
Human   366 FDMFALTRGSSLADQRKEVKYEAPQATDGLAGALDARQQSTGAIPVTQACLMEDIEQWLSTDV-- 428

  Fly   405 NGNGGSASKVPETIRKMPQIDMLSEELFQQILPTQDRMPSFKRDPEKITLNDLARERMHIKAPEE 469
                |:.::.|:.:....:.|...||..:    ..||:|:.                      ..
Human   429 ----GNDAEEPKGVTSEGKFDKFLEERAK----AADRLPNL----------------------SS 463

  Fly   470 PTTANDPASDSAPAIATATATVDSIDDV 497
            |:....|...|.||....|...|  ||:
Human   464 PSAEGPPGPPSGPAPRKKTQEKD--DDM 489

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
GgaNP_572571.1 VHS_GGA 7..144 CDD:239624 29/139 (21%)
GAT 210..284 CDD:281166 16/76 (21%)
Alpha_adaptinC2 543..644 CDD:197886
TOM1NP_001129204.1 VHS_Tom1 12..152 CDD:239623 30/140 (21%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 171..212 4/52 (8%)
GAT_TOM1 214..308 CDD:260094 20/101 (20%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 307..336 7/28 (25%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C165141225
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D594067at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
32.850

Return to query results.
Submit another query.