Protein Alignment Gga and gga3b

DIOPT Version :10

• Sequence 1: NP_572571.1
• Gene: Gga / 31902
• FlyBaseID: FBgn0030141
• Length: 660
• Species: Drosophila melanogaster
• Sequence 2: XP_009297383.1
• Gene: gga3b / 100334661
• ZFINID: ZDB-GENE-131126-18
• Length: 709
• Species: Danio rerio
• Alignment Length: 725
• Identity: 183/725 - (25%)
• Similarity: 303/725 - (41%)
• Gaps: 138/725 - (19%)

  Fly     8 MEEMLERATNPAQKIDE----LGVQMFCIVVKSNAQ--------LVHK--AQEMIVAKVRSTNVT 58
            :|..|.:||:|..:.::    :|   ||..:....:        ||||  |||.
Zfish    12 LESWLNKATHPTNRQEDWEYIIG---FCDQINKELEGPQIAVRLLVHKFCAQEW----------- 62

  Fly    59 EATRAISLLEECMTQCGDDFQDEASKFRFLNELIRLVSKKYKGAETPHEVKQRIMECLLLWTTEF 123
            ||.:|:::||.||..||..|..|.:::|||||||::||..|.|.....:||.:|:|.|..||..|
Zfish    63 EALQALTVLEACMKNCGRRFHKEIARYRFLNELIKVVSPMYMGNSISEKVKSKIIEMLYSWTVAF 127

  Fly   124 PQRQKIRDAYDMLRKEGDIEHGTTEAAVAK----------RESVLGTIDEA-MFAKLIKSNNPEN 177
            |...||.:||..|:::|.:: ...|..|.|          :..|....|.. :.|:|::|.|||:
Zfish   128 PNEAKIAEAYQTLKRQGLVK-SDPELTVDKTLIPSPPARPKNPVFDNEDMGKLLAELLRSKNPED 191

  Fly   178 FKRANLLLQYRMAQEARRNDLLAQHRLVLCEVQETMQLLNQMLDTYD-PANQDVS-ETLHELYKS 240
            .:.||.|::..:.::..|...|.:....|.||...::||.:||..|| ..:.|.. |.:.|||:.
Zfish   192 LQEANRLIKNMVKEDDARVHKLTKRINTLEEVNNNVKLLTEMLSQYDRERSSDADRELIKELYER 256

  Fly   241 CKKHKPIFQHLPQLLDDSDAQLVADTLDANCALLATMQRYKLLVPSPTRSTAAALTTSAPTVASS 305
            |.|.:.....|....:|:|:.| .|.|.||..|...:..||.:|      ...|....|..:..:
Zfish   257 CDKLRRTAFKLATEAEDNDSSL-GDILKANDDLSRVISCYKRIV------EGQADDGEAEELRPA 314

  Fly   306 VKSTASSTTATTSSNNAQLLNELLGDLLIDGSNKAATTATTSLPNAAASGSNPLADLSDIFSS-- 368
            ......|.|.|        |.:|.|  |.:.|:..........|..|.:.:..::..:...||
Zfish   315 ANEACESGTGT--------LIDLAG--LDEPSSPPPPPPPAPAPTLAPAPAPQISLATQKASSIP 369

  Fly   369 -------ALAESEAKQQSQP------FQNATTLLEPQVISQGTTTEALANGNGGSASKVPETIRK 420
                   .||.:...|.|.|      .|::.:||:.:::|.|...              |.::..
Zfish   370 VLPPPPRRLAGAHGSQTSSPNHKAAEHQSSLSLLDDELLSLGLND--------------PPSVPN 420

  Fly   421 MPQIDMLSE------------ELFQQILPTQDRMPS------------FKRDPEKITLNDLARER 461
            .|::|.||.            :||..|.......||            ..:..:::::.|...|:
Zfish   421 RPKLDDLSAQWTSLQAPDPGLDLFGSISAPSAVFPSTHTPAPTSHTLTHAQGLQELSVLDFGGEK 485

  Fly   462 ----------------MHIKAPEEPTTANDP----ASDSAPAIATATA-TVDSIDDVPLLSDDVE 505
                            ..:.....|.::::|    ....:||::.|.| |..|....|.......
Zfish   486 SVCGASGIAGGAFGQSAAVMCSAAPLSSSNPFVSAPLSGSPAVSRAQAVTGGSAPGSPFFQPFSS 550

  Fly   506 KKDEAVVAPVTVVPPAKPLSEINVELDNIQATGEQRIVL-DDDDMQLSLNFTSDRPGHR--VSVI 567
            .......:|.....|:  |:.::|.|:.|:.:....:.: |.|.:::.|:|..|.|..|  |.|:
Zfish   551 PSHSLQSSPARSSEPS--LTNLHVPLEAIRPSKVLPVTMYDKDGVRVLLHFAMDCPPGRPDVLVM 613

  Fly   568 VISAQNKSRQPVRDFQFEASVKKPCKVRLLTPTDSQMPPHKPFRPATPINQVMLLLNPTGKAVDV 632
            |:|..|.:..|||:...:|:|.|..:|:|..|:.:::.|..|..|...|.|||||.||..:.|.:
Zfish   614 VVSLLNTAPLPVRNVVLQAAVPKSMRVKLQPPSGTEICPFNPILPPASITQVMLLANPLKERVRL 678

  Fly   633 TCIVGYKLGD 642
            ...:.|.||:
Zfish   679 RYKLAYLLGE 688

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Gga	NP_572571.1	VHS_GGA_metazoan	8..144	CDD:340769	52/149 (35%)
		GAT_GGA_meta	201..283	CDD:410582	27/83 (33%)
		Alpha_adaptinC2	543..644	CDD:197886	36/103 (35%)
gga3b	XP_009297383.1	VHS_ENTH_ANTH	9..148	CDD:470608	52/150 (35%)
		GGA_N-GAT	171..209	CDD:465702	10/37 (27%)
		GAT_GGA3	215..301	CDD:410587	28/92 (30%)
		Alpha_adaptinC2	588..701	CDD:197886	36/101 (36%)