DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG31904 and Slc6a2

DIOPT Version :10

Sequence 1:NP_723310.1 Gene:CG31904 / 319016 FlyBaseID:FBgn0260479 Length:403 Species:Drosophila melanogaster
Sequence 2:NP_112633.2 Gene:Slc6a2 / 83511 RGDID:621822 Length:617 Species:Rattus norvegicus


Alignment Length:242 Identity:55/242 - (22%)
Similarity:95/242 - (39%) Gaps:74/242 - (30%)


- Green bases have known domain annotations that are detailed below.


  Fly    84 RGRWAKSADFYFASCTHA--------FSSLIFSELSTFGILHGGWLLFIIAYLMGMLFYSLPIFL 140
            |..|.|..||..:....|        |..|.:.        :||. .|:|.|.:.::...:|:|.
  Rat    56 RETWGKKIDFLLSVVGFAVDLANVWRFPYLCYK--------NGGG-AFLIPYTLFLIIAGMPLFY 111

  Fly   141 IQAFLGQFSSSGTISAFRVAPIFKGIGYAILLLNLGTLTYYSIAAVVPLIYTVNSIHPVIPWMSC 205
            ::..||||:..|..:.:::.|.|||:|||::|:.|....||::.....|.|...|....:||.:|
  Rat   112 MELALGQFNREGAATVWKICPFFKGVGYAVILIALYVGFYYNVIIAWSLYYLFASFTLNLPWTNC 176

  Fly   206 NNSWNTQECS----------------------------------LHEN---YDVD---------- 223
            .::||:..|:                                  |||:   :|:.          
  Rat   177 GHAWNSPNCTDPKLLNASVLGDHTKYSKYKFTPAAEFYERGVLHLHESSGIHDIGLPQWQLLLCL 241

  Fly   224 FAVAVIFTLALAMGVQSS--------VIP--LLSQVAGHGLSYTAVS 260
            ..|.|:...:|..||::|        .:|  :|..:..||::....|
  Rat   242 MVVIVVLYFSLWKGVKTSGKVVWITATLPYFVLFVLLVHGVTLPGAS 288

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG31904NP_723310.1 SLC5-6-like_sbd 123..>243 CDD:444915 40/174 (23%)
Cuticle_4 276..344 CDD:464954
Slc6a2NP_112633.2 SLC5-6-like_sbd 56..615 CDD:444915 55/242 (23%)
Blue background indicates that the domain is not in the aligned region.

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