DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG31904 and slc6a4a

DIOPT Version :9

Sequence 1:NP_723310.1 Gene:CG31904 / 319016 FlyBaseID:FBgn0260479 Length:403 Species:Drosophila melanogaster
Sequence 2:NP_001035061.1 Gene:slc6a4a / 664719 ZFINID:ZDB-GENE-060314-1 Length:646 Species:Danio rerio


Alignment Length:252 Identity:71/252 - (28%)
Similarity:113/252 - (44%) Gaps:47/252 - (18%)


- Green bases have known domain annotations that are detailed below.


  Fly    19 ENSEHGTELPGDFIGEPVETESGGGMGGSLALAARRIRSRQVHSMAVRTGSAYDTLERP--YRH- 80
            |:.|:| .|..|.:.|. :.:||.|.|    ..:...||....|.....|:..|.:..|  :|. 
Zfish    22 ESQENG-RLVVDSVPEK-DQKSGSGPG----QVSNGYRSTSPQSPKEGAGTGTDRVNTPGTFRTL 80

  Fly    81 -------DKCRGRWAKSADFYFASCTHA--------FSSLIFSELSTFGILHGGWLLFIIAYLMG 130
                   |..|..|:|..||..:...:|        |..:.:.        :||. .|::.||:.
Zfish    81 VVQQTSLDPPRETWSKKMDFLLSVIGYAVDLGNVWRFPYICYQ--------NGGG-AFLLPYLLM 136

  Fly   131 MLFYSLPIFLIQAFLGQFSSSGTISAFR-VAPIFKGIGYAILLLNLGTLTYYSIAAVVPLIYTVN 194
            .:|..:|:|.::..||||..||.||.:: |.|||||||:||.::.|....||:......|.|.::
Zfish   137 AVFGGVPLFYMELALGQFHRSGCISIWKHVCPIFKGIGFAICIIALYIAFYYNTIMAWALYYLLS 201

  Fly   195 SIHPVIPWMSCNNSWNTQECSLHENYDV-------------DFAVAVIFTLALAMGV 238
            |....:||.:|||.|||..|:.:.:.|:             :|.|..:..:.|:.|:
Zfish   202 SFRATLPWTTCNNRWNTPNCTHYLSTDLNVSWTNNSISPAEEFYVRQVLQVHLSPGL 258

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG31904NP_723310.1 SLC5-6-like_sbd 123..>243 CDD:294310 44/130 (34%)
Cuticle_4 276..344 CDD:292577
slc6a4aNP_001035061.1 SLC5-6-like_sbd 91..628 CDD:294310 53/177 (30%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0733
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
21.810

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