DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG31904 and Slc6a12

DIOPT Version :9

Sequence 1:NP_723310.1 Gene:CG31904 / 319016 FlyBaseID:FBgn0260479 Length:403 Species:Drosophila melanogaster
Sequence 2:NP_059031.1 Gene:Slc6a12 / 50676 RGDID:620255 Length:628 Species:Rattus norvegicus


Alignment Length:190 Identity:52/190 - (27%)
Similarity:87/190 - (45%) Gaps:30/190 - (15%)


- Green bases have known domain annotations that are detailed below.


  Fly    47 SLALAARRIRSRQ----VHSMAVRTGSAYDTLERPYRHDKCRGRWAKSADFYFASCTHAFSSLIF 107
            ||:...|::...:    |.|.....|...|..::....|  ||:|....:|..:         :.
  Rat    11 SLSSMDRKVTVHEDGCPVVSWVPEEGEMMDQKDKDQVKD--RGQWTNKMEFVLS---------VA 64

  Fly   108 SELSTFGIL---------HGGWLLFIIAYLMGMLFYS--LPIFLIQAFLGQFSSSGTISAFR-VA 160
            .|:...|.:         :||...||..::   .|:|  :|:|.::..|||:||.|:::|:| :.
  Rat    65 GEIIGLGNVWRFPYLCYKNGGGAFFIPYFI---FFFSCGIPVFFLEVALGQYSSQGSVTAWRKIC 126

  Fly   161 PIFKGIGYAILLLNLGTLTYYSIAAVVPLIYTVNSIHPVIPWMSCNNSWNTQECSLHENY 220
            |:.:|||.|.:::......||.|.....|.|..:|....:||.:|.|||||:.|....||
  Rat   127 PLLQGIGMASVVIESYLNIYYIIILAWALFYLFSSFTWELPWTTCTNSWNTEHCVDFLNY 186

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG31904NP_723310.1 SLC5-6-like_sbd 123..>243 CDD:294310 36/101 (36%)
Cuticle_4 276..344 CDD:292577
Slc6a12NP_059031.1 SLC5-6-like_sbd 49..589 CDD:294310 45/152 (30%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0733
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR11616
Phylome 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
22.000

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