DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG31904 and slc6a1b

DIOPT Version :10

Sequence 1:NP_723310.1 Gene:CG31904 / 319016 FlyBaseID:FBgn0260479 Length:403 Species:Drosophila melanogaster
Sequence 2:NP_001007363.1 Gene:slc6a1b / 492490 ZFINID:ZDB-GENE-041114-57 Length:600 Species:Danio rerio


Alignment Length:141 Identity:44/141 - (31%)
Similarity:71/141 - (50%) Gaps:7/141 - (4%)


- Green bases have known domain annotations that are detailed below.


  Fly    84 RGRWAKSADFYFASCTHAFSSLIFSELSTFGILHG--GWLLFIIAYLMGMLFYSLPIFLIQAFLG 146
            |..|....||..:...:|..   ...:..|..|.|  |...|:|.|.:.::|..:|:|.::..||
Zfish    43 RETWQGKFDFLLSCVGYAIG---LGNVWRFPYLCGKNGGGAFLIPYFLTLIFAGVPLFFLETALG 104

  Fly   147 QFSSSGTISAFRVAPIFKGIGYAILLLNLGTLTYYSIAAVVPLIYTVNSIHPVIPWMSCNNSWNT 211
            |::|.|.:..:::||:|||:|.|..:|:.....||.:.....:.|..||....:||.||:|.|||
Zfish   105 QYTSIGGLGVWKLAPMFKGVGLAAAVLSFWLNIYYIVIIAWAIYYLYNSFTTDLPWKSCDNPWNT 169

  Fly   212 QECSLHENYDV 222
            .:|  ..||.:
Zfish   170 DKC--FSNYSM 178

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG31904NP_723310.1 SLC5-6-like_sbd 123..>243 CDD:444915 35/100 (35%)
Cuticle_4 276..344 CDD:464954
slc6a1bNP_001007363.1 SLC5-6-like_sbd 2..600 CDD:444915 44/141 (31%)
Blue background indicates that the domain is not in the aligned region.

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