DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG31904 and Slc6a3

DIOPT Version :10

Sequence 1:NP_723310.1 Gene:CG31904 / 319016 FlyBaseID:FBgn0260479 Length:403 Species:Drosophila melanogaster
Sequence 2:NP_036826.1 Gene:Slc6a3 / 24898 RGDID:3715 Length:619 Species:Rattus norvegicus


Alignment Length:211 Identity:48/211 - (22%)
Similarity:86/211 - (40%) Gaps:62/211 - (29%)


- Green bases have known domain annotations that are detailed below.


  Fly    84 RGRWAKSADFYFASCTHA--------FSSLIFSELSTFGILHGGWLLFIIAYLMGMLFYSLPIFL 140
            |..|:|..||..:....|        |..|.:.        :||. .|::.||:.|:...:|:|.
  Rat    60 RETWSKKIDFLLSVIGFAVDLANVWRFPYLCYK--------NGGG-AFLVPYLLFMVIAGMPLFY 115

  Fly   141 IQAFLGQFSSSGTISAFRVAPIFKGIGYAILLLNLGTLTYYSIAAVVPLIYTVNSIHPVIPWMSC 205
            ::..||||:..|....:::.|:.||:|:.::|::.....:|::.....|.|..:|....:||:.|
  Rat   116 MELALGQFNREGAAGVWKICPVLKGVGFTVILISFYVGFFYNVIIAWALHYFFSSFTMDLPWIHC 180

  Fly   206 NNSWNTQECS--------------------------------LHENYDVD-------------FA 225
            ||:||:..||                                ||::..:|             ..
  Rat   181 NNTWNSPNCSDAHASNSSDGLGLNDTFGTTPAAEYFERGVLHLHQSRGIDDLGPPRWQLTACLVL 245

  Fly   226 VAVIFTLALAMGVQSS 241
            |.|:...:|..||::|
  Rat   246 VIVLLYFSLWKGVKTS 261

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG31904NP_723310.1 SLC5-6-like_sbd 123..>243 CDD:444915 38/164 (23%)
Cuticle_4 276..344 CDD:464954
Slc6a3NP_036826.1 SLC6sbd_DAT1 60..613 CDD:212083 48/211 (23%)
Interaction with TGFB1I1. /evidence=ECO:0000250 560..589
Blue background indicates that the domain is not in the aligned region.

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