DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG31904 and Slc6a18

DIOPT Version :9

Sequence 1:NP_723310.1 Gene:CG31904 / 319016 FlyBaseID:FBgn0260479 Length:403 Species:Drosophila melanogaster
Sequence 2:NP_001035782.1 Gene:Slc6a18 / 22598 MGIID:1336892 Length:615 Species:Mus musculus


Alignment Length:301 Identity:63/301 - (20%)
Similarity:109/301 - (36%) Gaps:79/301 - (26%)


- Green bases have known domain annotations that are detailed below.


  Fly    75 ERPYRHDKCRGRWAKSADFYFASCTHAFSSLIFSELSTFGIL---HGGWLLFIIAYLMGMLFYSL 136
            |||        :|..... |..||......|  ..:..|..|   |||. .|:|.|.:.::|..:
Mouse    16 ERP--------KWDNKLQ-YLLSCIGFAVGL--GNIWRFPYLCQTHGGG-AFLIPYFIALVFEGI 68

  Fly   137 PIFLIQAFLGQFSSSGTISAFR-VAPIFKGIGYAILLLNLGTLTYYSIAAVVPLIYTVNSIHPVI 200
            |:|.|:..:||....|:|..:: ::|...|:|.....::.....||:...:..|.:.:||....:
Mouse    69 PLFYIELAIGQRLRRGSIGVWKTISPYLGGVGLGCFSVSFLVSLYYNTVLLWVLWFFLNSFQHPL 133

  Fly   201 PWMSC----NNSWNTQEC-------------SLHENYDVDFAVAVIFTLALAM------------ 236
            ||.:|    |.:...|||             :|:...|:.....:.:.|.|.:            
Mouse   134 PWSTCPLDLNRTGFVQECQSSGTVSYFWYRQTLNITSDISNTGTIQWKLFLCLVACWSTVYLCVI 198

  Fly   237 -GVQSSVIPLLSQVAGHGLSYTAVSGPAVVASPWAVPAAHWPAAV---------------NVASW 285
             |::|:         |..:.:||:. |.:|.:.:.:.....|.|.               |...|
Mouse   199 RGIEST---------GKVIYFTALF-PYLVLTIFLIRGLTLPGATEGLIYLFTPNMKTLQNPRVW 253

  Fly   286 PPAAIHAAAPAVLAAPAPAVVAAHAP--------SVVVAPV 318
            ..||........||.......|::.|        :|::|.|
Mouse   254 LDAATQIFFSLSLAFGGHIAFASYNPPRNNCEKDAVIIALV 294

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG31904NP_723310.1 SLC5-6-like_sbd 123..>243 CDD:294310 32/150 (21%)
Cuticle_4 276..344 CDD:292577 13/66 (20%)
Slc6a18NP_001035782.1 SLC6sbd_B0AT3 16..591 CDD:212086 63/301 (21%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0733
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.900

Return to query results.
Submit another query.