DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG31904 and Slc6a6

DIOPT Version :9

Sequence 1:NP_723310.1 Gene:CG31904 / 319016 FlyBaseID:FBgn0260479 Length:403 Species:Drosophila melanogaster
Sequence 2:XP_030111163.1 Gene:Slc6a6 / 21366 MGIID:98488 Length:631 Species:Mus musculus


Alignment Length:183 Identity:54/183 - (29%)
Similarity:88/183 - (48%) Gaps:22/183 - (12%)


- Green bases have known domain annotations that are detailed below.


  Fly    84 RGRWAKSADFYFASCTHAFSSLIFSELSTFGIL---HGGWLLFIIAYLMGMLFYSLPIFLIQAFL 145
            |.:|:...||.. |....|..|  ..:..|..|   :||. .|:|.|.:.:....||:|.::..:
Mouse    51 REKWSSKIDFVL-SVAGGFVGL--GNVWRFPYLCYKNGGG-AFLIPYFIFLFGSGLPVFFLEVII 111

  Fly   146 GQFSSSGTISAF-RVAPIFKGIGYA----ILLLNLGTLTYYSIAAVVPLIYTVNSIHPVIPWMSC 205
            ||::|.|.|:.: ::.|:|.|||||    :.|||:    ||.:.......|..:|....:||..|
Mouse   112 GQYTSEGGITCWEKICPLFSGIGYASIVIVSLLNV----YYIVILAWATYYLFHSFQKDLPWAHC 172

  Fly   206 NNSWNTQEC-----SLHENYDVDFAVAVIFTLALAMGVQSSVIPLLSQVAGHG 253
            |:||||.:|     ..:|::.|..:.| .||..:....:.:|:.|.|.:...|
Mouse   173 NHSWNTPQCMEDTLRRNESHWVSLSTA-NFTSPVIEFWERNVLSLSSGIDNPG 224

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG31904NP_723310.1 SLC5-6-like_sbd 123..>243 CDD:294310 39/129 (30%)
Cuticle_4 276..344 CDD:292577
Slc6a6XP_030111163.1 SLC5-6-like_sbd 51..592 CDD:382020 54/183 (30%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0733
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR11616
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
22.000

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