DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG31904 and Slc6a12

DIOPT Version :9

Sequence 1:NP_723310.1 Gene:CG31904 / 319016 FlyBaseID:FBgn0260479 Length:403 Species:Drosophila melanogaster
Sequence 2:NP_001368835.1 Gene:Slc6a12 / 14411 MGIID:95628 Length:628 Species:Mus musculus


Alignment Length:172 Identity:51/172 - (29%)
Similarity:81/172 - (47%) Gaps:36/172 - (20%)


- Green bases have known domain annotations that are detailed below.


  Fly    82 KCRGRWAKSADFYFASCTHAFSSLIFSELSTFGIL---------HGGWLLFIIAYLMGMLFYS-- 135
            |.||:|....:|..:         :..|:...|.:         :||...||..::   .|:|  
Mouse    48 KDRGQWTNKMEFVLS---------VAGEIIGLGNVWRFPYLCYKNGGGAFFIPYFI---FFFSCG 100

  Fly   136 LPIFLIQAFLGQFSSSGTISAFR-VAPIFKGIGYAILLLNLGTLTYYSIAAVVPLIYTVNSIHPV 199
            :|:|.::..|||:||.|:::|:| :.|:.:|||.|.:::......||.|.....|.|..:|....
Mouse   101 IPVFFLEVALGQYSSQGSVTAWRKICPLLQGIGMASVVIESYLNIYYIIILAWALFYLFSSFTWE 165

  Fly   200 IPWMSCNNSWNTQECSLHENYDVDFAVAVIFTLALAMGVQSS 241
            :||.:|.|||||:.|       |||     ...:.|.||.||
Mouse   166 LPWTTCTNSWNTEHC-------VDF-----LNHSSARGVSSS 195

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG31904NP_723310.1 SLC5-6-like_sbd 123..>243 CDD:294310 42/122 (34%)
Cuticle_4 276..344 CDD:292577
Slc6a12NP_001368835.1 SLC5-6-like_sbd 49..589 CDD:382020 50/171 (29%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0733
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR11616
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
22.000

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