DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG31904 and slc6a4l

DIOPT Version :10

Sequence 1:NP_723310.1 Gene:CG31904 / 319016 FlyBaseID:FBgn0260479 Length:403 Species:Drosophila melanogaster
Sequence 2:XP_012825214.2 Gene:slc6a4l / 100496361 XenbaseID:XB-GENE-981144 Length:590 Species:Xenopus tropicalis


Alignment Length:272 Identity:65/272 - (23%)
Similarity:103/272 - (37%) Gaps:86/272 - (31%)


- Green bases have known domain annotations that are detailed below.


  Fly    84 RGRWAKSADFYFASCTHA--------FSSLIFSELSTFGILHGGWLLFIIAYLMGMLFYSLPIFL 140
            |.:|:|..||..:....|        |..:.:.        :||. .|:|.|.:..:|..:|:|.
 Frog    37 RDKWSKKMDFLLSVIGFAVDLGNVWRFPYICYQ--------NGGG-AFLIPYTIMAIFGGVPLFY 92

  Fly   141 IQAFLGQFSSSGTISAF-RVAPIFKGIGYAILLLNLGTLTYYSIAAVVPLIYTVNSIHPVIPWMS 204
            ::..||||...|.|..: |:.|||||||:||.::.|....||:......|.|..:|....:||.:
 Frog    93 MELALGQFHRMGAIPIWKRICPIFKGIGFAICIIALYVSFYYNTIIAWALFYFYSSFTETLPWTN 157

  Fly   205 CNNSWNTQECS----------------------------LHENYDVD----------FAVAVIFT 231
            |:|.|||..|:                            :||...:|          ..:.:|||
 Frog   158 CDNPWNTPNCTNYFGRSNITWNNYSKSPAEEFYTRKVLGIHEAEGLDNVGGLRWQLILCLFIIFT 222

  Fly   232 L---ALAMGVQSS------------VIPLLSQVAGHGLSYTAVSGPAVVASPWA----VPAAHWP 277
            :   :|..||::|            |:.|:..:.|           |.:...|.    .....|.
 Frog   223 IVYFSLWKGVKTSGKVVWVTATLPYVVLLILLIRG-----------ATLPGAWRGILFYLRPKWE 276

  Fly   278 AAVNVASWPPAA 289
            ..::.|.|..||
 Frog   277 KLMDTAVWVDAA 288

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG31904NP_723310.1 SLC5-6-like_sbd 123..>243 CDD:444915 46/173 (27%)
Cuticle_4 276..344 CDD:464954 5/14 (36%)
slc6a4lXP_012825214.2 SLC5-6-like_sbd 37..573 CDD:444915 65/272 (24%)

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