DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG31875 and rcor3

DIOPT Version :10

Sequence 1:NP_723509.1 Gene:CG31875 / 318996 FlyBaseID:FBgn0051875 Length:161 Species:Drosophila melanogaster
Sequence 2:XP_031757914.1 Gene:rcor3 / 779496 XenbaseID:XB-GENE-981586 Length:560 Species:Xenopus tropicalis


Alignment Length:155 Identity:39/155 - (25%)
Similarity:63/155 - (40%) Gaps:33/155 - (21%)


- Green bases have known domain annotations that are detailed below.


  Fly    18 ATLPDFVPPWKREQDLQQLQHRASILWSPQLQDQDDKAVREYLDYAASLYDIEEEQALFILRRHG 82
            |.:|:|.|...:..|...   ...::|||.....|.| :.||:..|...:....||||.:|..|.
 Frog    53 ARIPEFDPGATKYTDKDS---GGMLVWSPHHNIADLK-LDEYIAIAKEKHGYNVEQALGMLFWHK 113

  Fly    83 Y-------DLPLAHRRLEKTETARGCRY----HRWKAEDLIRLTKAFEQYGTDFAKVRKELPHFP 136
            :       |||               .:    ..|..||.:...:||..:|..|.::::.||...
 Frog   114 HNIEKSLADLP---------------NFTPFPDEWTVEDKVLFEQAFSFHGKSFHRIQQMLPDKS 163

  Fly   137 LAEL-RLYFSFMSSALETD--DQQA 158
            :|.| :.|:|:..:...|.  |:||
 Frog   164 IASLVKYYYSWKKTRSRTSLMDRQA 188

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG31875NP_723509.1 None
rcor3XP_031757914.1 ELM2 45..96 CDD:460214 13/46 (28%)
SANT 132..176 CDD:473887 13/43 (30%)
Myb_DNA-binding 355..398 CDD:459731
PHA03247 <437..558 CDD:223021
Blue background indicates that the domain is not in the aligned region.

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