DRSC/TRiP Functional Genomics Resources

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Protein Alignment Fum4 and FUM2

DIOPT Version :9

Sequence 1:NP_723527.1 Gene:Fum4 / 318995 FlyBaseID:FBgn0051874 Length:484 Species:Drosophila melanogaster
Sequence 2:NP_851166.1 Gene:FUM2 / 835168 AraportID:AT5G50950 Length:510 Species:Arabidopsis thaliana


Alignment Length:435 Identity:244/435 - (56%)
Similarity:312/435 - (71%) Gaps:3/435 - (0%)


- Green bases have known domain annotations that are detailed below.


  Fly    24 RVEYDSMGAVHIPLDRMFGPQTMRSLMKFPIGGVEERMPRPLIKALGIVKKSAAETNKIHCLEEH 88
            |.|.|:.|.:.:|.|:::|.||.|||..|.|||..||||.|:::|.|::||.||:.|..:.|:..
plant    40 REERDTFGPIQVPSDKLWGAQTQRSLQNFEIGGDRERMPEPIVRAFGVLKKCAAKVNMEYGLDPM 104

  Fly    89 LCDAISKACDDVISGKLYDEEHFPLVIWQDGSGEHTNMNVNEVICNRAIEILGGQMGSKEPVDPN 153
            :.:||.:|..:|..|||.|  |||||:||.|||..:|||.||||.|||.||||.:.|.| .|.||
plant   105 IGEAIMEAAQEVAEGKLND--HFPLVVWQTGSGTQSNMNANEVIANRAAEILGHKRGEK-IVHPN 166

  Fly   154 EHVNMAQSSHDTFSTAVRIAVAMQLQETLYPSLRTFIDLLGKKSNDWMDLIKIGRTHLMDAVPLS 218
            :|||.:|||:|||.|.:.||.|.::...|.|||:.....|..||.::.|::||||||..||.||:
plant   167 DHVNRSQSSNDTFPTVMHIAAATEITSRLIPSLKNLHSSLESKSFEFKDIVKIGRTHTQDATPLT 231

  Fly   219 LGQEFSGYQQQLVNGRTRLDCAMCRLYQLPMGGTSVGTKVDTKAEYSAQCIKRIAELTFLPFVES 283
            |||||.||..|:..|..|:.|.:.|:|||..|||:|||.::||..:..:....:||.|.||||.:
plant   232 LGQEFGGYATQVEYGLNRVACTLPRIYQLAQGGTAVGTGLNTKKGFDVKIAAAVAEETNLPFVTA 296

  Fly   284 PNFFESISACDCLVELHGELNTIAASVMKIANDIRFLGSGPRCGFGELHLPENEPGSSIMPGKVN 348
            .|.||:::|.|..||..|.|||||.|:|||||||||||||||||.|||.||||||||||||||||
plant   297 ENKFEALAAHDACVETSGSLNTIATSLMKIANDIRFLGSGPRCGLGELSLPENEPGSSIMPGKVN 361

  Fly   349 PTQCEAMSMICAQVMGNHVAVSMGGSSGHFQLNTFMPMIASNVLRSITLLGDGMKSFCTNCLEGI 413
            ||||||::|:|||||||||||::|||:|||:||.|.|:|||.:|.||.|:.|...||..||:.||
plant   362 PTQCEALTMVCAQVMGNHVAVTIGGSNGHFELNVFKPVIASALLHSIRLIADASASFEKNCVRGI 426

  Fly   414 EPNRSKIGSIVKESLMLVTALSPHIGYERSAAIAKAAHHNGTTLE 458
            |.||.:|..::.|||||||:|:|.|||:.:||:||.||..|.||:
plant   427 EANRERISKLLHESLMLVTSLNPKIGYDNAAAVAKRAHKEGCTLK 471

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Fum4NP_723527.1 fumC 22..483 CDD:234779 244/435 (56%)
Fumarase_classII 24..480 CDD:176465 244/435 (56%)
FUM2NP_851166.1 Fumarase_classII 40..471 CDD:176465 243/433 (56%)
PLN00134 46..503 CDD:215069 241/429 (56%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0114
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG61095
OrthoDB 1 1.010 - - D1022919at2759
OrthoFinder 1 1.000 - - FOG0002459
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 1 0.900 - - OOG6_101016
Panther 1 1.100 - - O PTHR11444
Phylome 1 0.910 - -
SonicParanoid 1 1.000 - - X1641
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
98.790

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