DRSC/TRiP Functional Genomics Resources

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Protein Alignment Fum4 and Fum2

DIOPT Version :9

Sequence 1:NP_723527.1 Gene:Fum4 / 318995 FlyBaseID:FBgn0051874 Length:484 Species:Drosophila melanogaster
Sequence 2:NP_727109.2 Gene:Fum2 / 31606 FlyBaseID:FBgn0029890 Length:503 Species:Drosophila melanogaster


Alignment Length:461 Identity:283/461 - (61%)
Similarity:366/461 - (79%) Gaps:0/461 - (0%)


- Green bases have known domain annotations that are detailed below.


  Fly    24 RVEYDSMGAVHIPLDRMFGPQTMRSLMKFPIGGVEERMPRPLIKALGIVKKSAAETNKIHCLEEH 88
            |.|.|:.|.:.:|.|:::|.|||||.:.||||.:.||||.|:|:|:||:||:.||.||.:.|:..
  Fly    43 RTEKDTFGELKVPADKLYGAQTMRSKLNFPIGDIGERMPMPVIQAMGILKKACAEVNKDYGLDGK 107

  Fly    89 LCDAISKACDDVISGKLYDEEHFPLVIWQDGSGEHTNMNVNEVICNRAIEILGGQMGSKEPVDPN 153
            :.||:|.|||||||||||.:.||||||||.|||..||||.||||.|.||:::||::|||:||.||
  Fly   108 VSDAVSCACDDVISGKLYKQGHFPLVIWQTGSGTQTNMNTNEVISNAAIKMMGGELGSKKPVHPN 172

  Fly   154 EHVNMAQSSHDTFSTAVRIAVAMQLQETLYPSLRTFIDLLGKKSNDWMDLIKIGRTHLMDAVPLS 218
            :|||.:|||:|||.||:.|:|.|:|.|.|.|::....|.|..||:::.|:||||||||||||||:
  Fly   173 DHVNKSQSSNDTFPTAIHISVGMELNERLVPAVTHLRDALKSKSDEFKDIIKIGRTHLMDAVPLT 237

  Fly   219 LGQEFSGYQQQLVNGRTRLDCAMCRLYQLPMGGTSVGTKVDTKAEYSAQCIKRIAELTFLPFVES 283
            ||||||||.|||.||..|:...:.|:|:|.:|||:|||.::|:..::.:..|||:|||.||||.:
  Fly   238 LGQEFSGYTQQLTNGLERIKGCLPRVYELALGGTAVGTGLNTRKGFAEKVAKRISELTCLPFVSA 302

  Fly   284 PNFFESISACDCLVELHGELNTIAASVMKIANDIRFLGSGPRCGFGELHLPENEPGSSIMPGKVN 348
            ||.||:::|.|.:||:||.|||||.|:||||||||.||||||||.|||.||||||||||||||||
  Fly   303 PNKFEALAARDAMVEVHGVLNTIAVSLMKIANDIRLLGSGPRCGLGELMLPENEPGSSIMPGKVN 367

  Fly   349 PTQCEAMSMICAQVMGNHVAVSMGGSSGHFQLNTFMPMIASNVLRSITLLGDGMKSFCTNCLEGI 413
            |||||:|:|:|||||||.|||::|||:|||:||.|.|::.|||||||.||.||..:|..||:||:
  Fly   368 PTQCESMTMLCAQVMGNQVAVTIGGSNGHFELNVFKPLVVSNVLRSIRLLADGSMTFSKNCVEGL 432

  Fly   414 EPNRSKIGSIVKESLMLVTALSPHIGYERSAAIAKAAHHNGTTLEQEAILDGIQREDFREWVQPS 478
            :.|:.:|..|:.|||||||||:|||||:::|.|||.||.|.|||::||:..||..|.|:|||.|.
  Fly   433 QANKERIDKIMNESLMLVTALNPHIGYDKAALIAKTAHKNKTTLKEEALKTGITEEQFKEWVNPK 497

  Fly   479 KMLGPE 484
            :||||:
  Fly   498 EMLGPK 503

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Fum4NP_723527.1 fumC 22..483 CDD:234779 281/458 (61%)
Fumarase_classII 24..480 CDD:176465 279/455 (61%)
Fum2NP_727109.2 fumC 42..503 CDD:234779 282/459 (61%)
Fumarase_classII 43..499 CDD:176465 279/455 (61%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45471477
Domainoid 1 1.000 390 1.000 Domainoid score I15
eggNOG 1 0.900 - - E1_COG0114
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 559 1.000 Inparanoid score I15
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1022919at2759
OrthoFinder 1 1.000 - - FOG0002459
OrthoInspector 1 1.000 - - otm51349
orthoMCL 1 0.900 - - OOG6_101016
Panther 1 1.100 - - P PTHR11444
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X1641
1110.800

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