DRSC/TRiP Functional Genomics Resources

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Protein Alignment Fum4 and Fum1

DIOPT Version :9

Sequence 1:NP_723527.1 Gene:Fum4 / 318995 FlyBaseID:FBgn0051874 Length:484 Species:Drosophila melanogaster
Sequence 2:NP_572339.1 Gene:Fum1 / 31605 FlyBaseID:FBgn0286222 Length:495 Species:Drosophila melanogaster


Alignment Length:469 Identity:289/469 - (61%)
Similarity:372/469 - (79%) Gaps:2/469 - (0%)


- Green bases have known domain annotations that are detailed below.


  Fly    17 RLIVPDTRVEYDSMGAVHIPLDRMFGPQTMRSLMKFPIGGVEERMPRPLIKALGIVKKSAAETNK 81
            ||...:.|||.|:.|.:.:|.|:.:|.|||||.:.|||||..||||:|:::|:||:||:|||.||
  Fly    28 RLASQEFRVESDTFGELKVPADKYYGAQTMRSQINFPIGGATERMPKPVVQAMGILKKAAAEVNK 92

  Fly    82 IHCLEEHLCDAISKACDDVISGKLYDEEHFPLVIWQDGSGEHTNMNVNEVICNRAIEILGGQMGS 146
            ...|:..:.:|||||.|||||||||| :||||||||.|||..:||||||||.|||||:|||::||
  Fly    93 EFGLDSKVSEAISKAADDVISGKLYD-DHFPLVIWQTGSGTQSNMNVNEVISNRAIELLGGKLGS 156

  Fly   147 KEPVDPNEHVNMAQSSHDTFSTAVRIAVAMQLQETLYPSLRTFIDLLGKKSNDWMDLIKIGRTHL 211
            |.||.||:|||.:|||:|||.||:.|:||::|...|.|:::|..|.|..||.::.|:|||||||.
  Fly   157 KTPVHPNDHVNKSQSSNDTFPTAIHISVALELNNNLKPAIKTLHDALRAKSEEFKDIIKIGRTHT 221

  Fly   212 MDAVPLSLGQEFSGYQQQLVNGRTRLDCAMCRLYQLPMGGTSVGTKVDTKAEYSAQCIKRIAELT 276
            ||||||:||||||||.|||...:.|:|..:.|:|:|.:|||:|||.::|:..::.:|..:|||||
  Fly   222 MDAVPLTLGQEFSGYAQQLAYAQERIDACLPRVYELALGGTAVGTGLNTRKGFAEKCAAKIAELT 286

  Fly   277 FLPFVESPNFFESISACDCLVELHGELNTIAASVMKIANDIRFLGSGPRCGFGELHLPENEPGSS 341
            .||||.:||.||:::|.|.:||:||.|||||.|:|||||||||||||||||.|||.|||||||||
  Fly   287 SLPFVTAPNKFEALAARDAMVEVHGVLNTIAVSLMKIANDIRFLGSGPRCGLGELSLPENEPGSS 351

  Fly   342 IMPGKVNPTQCEAMSMICAQVMGNHVAVSMGGSSGHFQLNTFMPMIASNVLRSITLLGDGMKSFC 406
            ||||||||||||:::|:.||||||.|||::|||:|||:||.|.|:|.|||||||.||.||.::|.
  Fly   352 IMPGKVNPTQCESLTMLSAQVMGNQVAVTIGGSNGHFELNVFKPLIVSNVLRSIRLLSDGSRTFT 416

  Fly   407 TNCLEGIEPNRSKIGSIVKESLMLVTALSPHIGYERSAAIAKAAHHNGTTLEQEAI-LDGIQRED 470
            .||:.||:.||..|..|:.|||||||||:|||||:::|.|||.||.|||||::||| |..:..:.
  Fly   417 ANCVNGIQANRENIAKIMNESLMLVTALNPHIGYDKAAKIAKTAHKNGTTLKEEAINLGYLTEQQ 481

  Fly   471 FREWVQPSKMLGPE 484
            |.:||:|.:||||:
  Fly   482 FNDWVRPEQMLGPK 495

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Fum4NP_723527.1 fumC 22..483 CDD:234779 285/461 (62%)
Fumarase_classII 24..480 CDD:176465 283/456 (62%)
Fum1NP_572339.1 fumC 31..495 CDD:234779 286/464 (62%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45471478
Domainoid 1 1.000 390 1.000 Domainoid score I15
eggNOG 1 0.900 - - E1_COG0114
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 559 1.000 Inparanoid score I15
Isobase 1 0.950 - 0 Normalized mean entropy S145
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1022919at2759
OrthoFinder 1 1.000 - - FOG0002459
OrthoInspector 1 1.000 - - otm51349
orthoMCL 1 0.900 - - OOG6_101016
Panther 1 1.100 - - P PTHR11444
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X1641
1211.750

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