DRSC/TRiP Functional Genomics Resources

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Protein Alignment Fum4 and FH

DIOPT Version :9

Sequence 1:NP_723527.1 Gene:Fum4 / 318995 FlyBaseID:FBgn0051874 Length:484 Species:Drosophila melanogaster
Sequence 2:NP_000134.2 Gene:FH / 2271 HGNCID:3700 Length:510 Species:Homo sapiens


Alignment Length:462 Identity:275/462 - (59%)
Similarity:349/462 - (75%) Gaps:3/462 - (0%)


- Green bases have known domain annotations that are detailed below.


  Fly    24 RVEYDSMGAVHIPLDRMFGPQTMRSLMKFPIGGVEERMPRPLIKALGIVKKSAAETNKIHCLEEH 88
            |:|||:.|.:.:|.|:.:|.||:||.|.|.||||.||||.|:|||.||:|::|||.|:.:.|:..
Human    51 RIEYDTFGELKVPNDKYYGAQTVRSTMNFKIGGVTERMPTPVIKAFGILKRAAAEVNQDYGLDPK 115

  Fly    89 LCDAISKACDDVISGKLYDEEHFPLVIWQDGSGEHTNMNVNEVICNRAIEILGGQMGSKEPVDPN 153
            :.:||.||.|:|..|||.|  |||||:||.|||..|||||||||.|||||:|||::|||.||.||
Human   116 IANAIMKAADEVAEGKLND--HFPLVVWQTGSGTQTNMNVNEVISNRAIEMLGGELGSKIPVHPN 178

  Fly   154 EHVNMAQSSHDTFSTAVRIAVAMQLQETLYPSLRTFIDLLGKKSNDWMDLIKIGRTHLMDAVPLS 218
            :|||.:|||:|||.||:.||.|:::.|.|.|.|:...|.|..||.::..:|||||||..|||||:
Human   179 DHVNKSQSSNDTFPTAMHIAAAIEVHEVLLPGLQKLHDALDAKSKEFAQIIKIGRTHTQDAVPLT 243

  Fly   219 LGQEFSGYQQQLVNGRTRLDCAMCRLYQLPMGGTSVGTKVDTKAEYSAQCIKRIAELTFLPFVES 283
            ||||||||.||:....||:..||.|:|:|..|||:|||.::|:..::.:...::|.||.||||.:
Human   244 LGQEFSGYVQQVKYAMTRIKAAMPRIYELAAGGTAVGTGLNTRIGFAEKVAAKVAALTGLPFVTA 308

  Fly   284 PNFFESISACDCLVELHGELNTIAASVMKIANDIRFLGSGPRCGFGELHLPENEPGSSIMPGKVN 348
            ||.||:::|.|.||||.|.:||.|.|:|||||||||||||||.|.|||.||||||||||||||||
Human   309 PNKFEALAAHDALVELSGAMNTTACSLMKIANDIRFLGSGPRSGLGELILPENEPGSSIMPGKVN 373

  Fly   349 PTQCEAMSMICAQVMGNHVAVSMGGSSGHFQLNTFMPMIASNVLRSITLLGDGMKSFCTNCLEGI 413
            |||||||:|:.||||||||||::|||:|||:||.|.||:..|||.|..||||...||..||:.||
Human   374 PTQCEAMTMVAAQVMGNHVAVTVGGSNGHFELNVFKPMMIKNVLHSARLLGDASVSFTENCVVGI 438

  Fly   414 EPNRSKIGSIVKESLMLVTALSPHIGYERSAAIAKAAHHNGTTLEQEAI-LDGIQREDFREWVQP 477
            :.|..:|..::.|||||||||:|||||:::|.|||.||.||:||::.|| |..:..|.|.|||:|
Human   439 QANTERINKLMNESLMLVTALNPHIGYDKAAKIAKTAHKNGSTLKETAIELGYLTAEQFDEWVKP 503

  Fly   478 SKMLGPE 484
            ..||||:
Human   504 KDMLGPK 510

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Fum4NP_723527.1 fumC 22..483 CDD:234779 273/459 (59%)
Fumarase_classII 24..480 CDD:176465 271/456 (59%)
FHNP_000134.2 fumC 49..510 CDD:234779 274/460 (60%)
Substrate binding. /evidence=ECO:0000250|UniProtKB:P05042 145..147 1/1 (100%)
Substrate binding (B site). /evidence=ECO:0000250|UniProtKB:P05042 176..179 1/2 (50%)
Substrate binding. /evidence=ECO:0000250|UniProtKB:P05042 186..188 1/1 (100%)
Substrate binding. /evidence=ECO:0000250|UniProtKB:P9WN93 371..373 1/1 (100%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C165159915
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0114
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 1 0.950 - 0 Normalized mean entropy S145
OMA 1 1.010 - - QHG61095
OrthoDB 1 1.010 - - D1022919at2759
OrthoFinder 1 1.000 - - FOG0002459
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 1 0.900 - - OOG6_101016
Panther 1 1.100 - - O PTHR11444
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X1641
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
User_Submission 00.000 Not matched by this tool.
1110.670

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