DRSC/TRiP Functional Genomics Resources

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Protein Alignment LPCAT and GPT2

DIOPT Version :9

Sequence 1:NP_001036265.1 Gene:LPCAT / 31899 FlyBaseID:FBgn0052699 Length:533 Species:Drosophila melanogaster
Sequence 2:NP_012993.3 Gene:GPT2 / 853941 SGDID:S000001775 Length:743 Species:Saccharomyces cerevisiae


Alignment Length:396 Identity:76/396 - (19%)
Similarity:138/396 - (34%) Gaps:128/396 - (32%)


- Green bases have known domain annotations that are detailed below.


  Fly   136 HYVTMKGRAATAKEAPILVVAPHSS--------YV----------DSILVVASGPPSIVAKRETA 182
            |...:|||:...:..|:......|:        |:          |..::::|  |...:|.:..
Yeast   159 HPEIIKGRSKNPQTTPVNFTKRFSAKSLLGLPDYLSNAQIKEIPDDETIILSS--PFRTSKSKVV 221

  Fly   183 DIPLLGKIINYAQPIYVQREDPNSRQNTIRDIVDRARSTDDWPQVVIFAEGTCTNRTALIKFKPG 247
            ::...|....||:.|        ....|.:.:.|...:..   .|.||.||...:|.:|:..|.|
Yeast   222 ELLTNGTNFKYAEKI--------DNTETFQSVFDHLHTKG---CVGIFPEGGSHDRPSLLPIKAG 275

  Fly   248 AFYPG-----------VPVQPVLLKYPNKYDTFTWTWDGPGVLRLLWLTMTQFYNRCEIEYLPVY 301
            .....           |.|.|..|.|.::                     .:|.:|..:||    
Yeast   276 VAIMALGAVAADPTMKVAVVPCGLHYFHR---------------------NKFRSRAVLEY---- 315

  Fly   302 TPSEDEVAD---ANLYANNVREVMAKAL--------GVPTSDYSFEDVIVMSRAR------DMKI 349
              .|..|.|   ..:|.::.||.::|.|        .|..:...::.::|:..||      .:::
Yeast   316 --GEPIVVDGKYGEMYKDSPRETVSKLLKKITNSLFSVTENAPDYDTLMVIQAARRLYQPVKVRL 378

  Fly   350 PFPGDIVEIERTIEKLGLNESQRDAELCKGFLRLSN-----TDRLDIITFGELLQVDLKNTDLHK 409
            |.|. ||||.|.: ..|.::.:.|..:    :.|..     ..:||.:...:...:.||.|.|..
Yeast   379 PLPA-IVEINRRL-LFGYSKFKDDPRI----IHLKKLVYDYNRKLDSVGLKDHQVMQLKTTKLEA 437

  Fly   410 L---------------FALLDHRRSGTVSLKS-FLLCSLF-------------CKLKNSDLLTFL 445
            |               ||:|.  ..|::.... |::|.::             .|:|.:|||...
Yeast   438 LRCFVTLIVRLIKFSVFAILS--LPGSILFTPIFIICRVYSEKKAKEGLKKSLVKIKGTDLLATW 500

  Fly   446 RALIHL 451
            :.::.|
Yeast   501 KLIVAL 506

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
LPCATNP_001036265.1 PlsC 87..>265 CDD:223282 31/157 (20%)
LPLAT_LPCAT1-like 126..338 CDD:153253 44/241 (18%)
EF-hand_8 455..507 CDD:290545
GPT2NP_012993.3 LPLAT 45..348 CDD:418432 43/228 (19%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0204
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.900

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