DRSC/TRiP Functional Genomics Resources

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Protein Alignment LPCAT and AT1G80950

DIOPT Version :9

Sequence 1:NP_001036265.1 Gene:LPCAT / 31899 FlyBaseID:FBgn0052699 Length:533 Species:Drosophila melanogaster
Sequence 2:NP_565249.1 Gene:AT1G80950 / 844435 AraportID:AT1G80950 Length:398 Species:Arabidopsis thaliana


Alignment Length:410 Identity:112/410 - (27%)
Similarity:185/410 - (45%) Gaps:87/410 - (21%)


- Green bases have known domain annotations that are detailed below.


  Fly     4 STIKPTGGDEVPPAG-----VVGNVADVGVAASLTKRD------SEEDTWASKGYNYINPFVHRI 57
            |.:|....:..||:.     ::.:.:|  :||::.:.|      :..|.:.:.|   :.||    
plant     3 SELKDLNSNSNPPSSKEDRPLLKSESD--LAAAIEELDKKFAPYARTDLYGTMG---LGPF---- 58

  Fly    58 EIDSHIEVAKIYVLTVLLLPIRVVGCVLSLISAWMFAC--IGLY--------------GMTLDDL 106
               ...|..|:.|..|.|:|:|.: ..:|::..:...|  ..|:              |:...:.
plant    59 ---PMTENIKLAVALVTLVPLRFL-LSMSILLLYYLICRVFTLFSAPYRGPEEEEDEGGVVFQED 119

  Fly   107 KAKPLTGWRKQM-----QYMTACGMRMVYTFGSFHY----------------------VTMKGRA 144
            .|. :.||::.:     ::::..   :::.|| |::                      :..||.|
plant   120 YAH-MEGWKRTVIVRSGRFLSRV---LLFVFG-FYWIHESCPDRDSDMDSNPKTTSTEINQKGEA 179

  Fly   145 ATAK-EAPILVVAPHSSYVDSILVVASGPPSIVAKRETADIPLLGKIINYAQPIYVQRE----DP 204
            ||.: |.|..:|:.|.||:|.:..:::..||.||||....:||:|.|......:|||||    |.
plant   180 ATEEPERPGAIVSNHVSYLDILYHMSASFPSFVAKRSVGKLPLVGLISKCLGCVYVQREAKSPDF 244

  Fly   205 NSRQNTIRDIVDRARSTDDWPQVVIFAEGTCTNRTALIKFKPGAFYPGVPVQPVLLKYPNKYDTF 269
            .....|:.:.|..|.|....|.:::|.|||.||...|:.||.|||..|.||.||:||||  |:.|
plant   245 KGVSGTVNERVREAHSNKSAPTIMLFPEGTTTNGDYLLTFKTGAFLAGTPVLPVILKYP--YERF 307

  Fly   270 TWTWDGPGVLRLLWLTMTQFYNRCEIEYLPVYTPSEDEVADANLYANNVREVMAKALGVPTSDYS 334
            :..||.....|.:...:.|..|..|:..||||.||::|..|..|||:|||::||....:..|:..
plant   308 SVAWDTISGARHILFLLCQVVNHLEVIRLPVYYPSQEEKDDPKLYASNVRKLMATEGNLILSELG 372

  Fly   335 FEDVIV--------MSRARD 346
            ..|..:        :|:.||
plant   373 LSDKRIYHATLNGNLSQTRD 392

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
LPCATNP_001036265.1 PlsC 87..>265 CDD:223282 63/225 (28%)
LPLAT_LPCAT1-like 126..338 CDD:153253 82/238 (34%)
EF-hand_8 455..507 CDD:290545
AT1G80950NP_565249.1 LPLAT_LPCAT1-like 140..377 CDD:153253 83/242 (34%)
PlsC <184..>309 CDD:223282 51/126 (40%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0204
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1266853at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 1 0.900 - - OOG6_100894
Panther 1 1.100 - - O PTHR23063
Phylome 1 0.910 - -
SonicParanoid 1 1.000 - - X772
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
65.820

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