DRSC/TRiP Functional Genomics Resources

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Protein Alignment LPCAT and LPAT4

DIOPT Version :10

Sequence 1:NP_001036265.1 Gene:LPCAT / 31899 FlyBaseID:FBgn0052699 Length:533 Species:Drosophila melanogaster
Sequence 2:NP_565098.1 Gene:LPAT4 / 843840 AraportID:AT1G75020 Length:378 Species:Arabidopsis thaliana


Alignment Length:426 Identity:86/426 - (20%)
Similarity:153/426 - (35%) Gaps:127/426 - (29%)


- Green bases have known domain annotations that are detailed below.


  Fly    75 LLPIRVV-GCVLSLI---SAWMF-------ACIGLYGMTLDDLK--AKPLTG-WRKQMQYM--TA 123
            |.|:|:: |.::.|:   :|:||       |.:||..:::...:  ...:.| |.....|:  |.
plant    17 LTPLRILRGLMILLVFLSTAFMFLLYFAPIAALGLRLLSVQQSRKVVSLIFGLWLALWPYLFETV 81

  Fly   124 CGMRMVYTFGSFHYVTMKGRAATAKEAPILVVAPHSSYVD-------SILVVASGPPSIVAKRET 181
            .|..:|:: |....|          |..:|::|.|.:.||       ::.....|....|.|...
plant    82 NGTTVVFS-GDIIPV----------EKRVLLIANHRTEVDWMYLWNIALRKGCLGYIKYVLKSSL 135

  Fly   182 ADIPLLGKIINYAQPIYVQREDPNSRQNTIRDIVDRARSTDDWPQ----VVIFAEGTCTNRTALI 242
            ..:|:.|...:..:.|.|:|     ::.....::.:..|:...||    :.:|.|||........
plant   136 MKLPIFGWGFHVLEFIPVER-----KREVDEPVLLQMLSSFKDPQEPLWLALFPEGTDFTEEKCK 195

  Fly   243 KFKPGAFYPGVP-VQPVLLKYPNKYDTFTWTWDGPGV-LRLLWLTMTQFYNRCEIEYLPVYTPSE 305
            :.:..|...|:| :..|||....          |.|| |.:|..::...|: ..|.|.|......
plant   196 RSQKFAAEVGLPALSNVLLPKTR----------GFGVCLEVLHNSLDAVYD-LTIAYKPRCPSFM 249

  Fly   306 DEV--ADANLYANNVREVMAKALGVPTSD----------YSFEDVIVMSRARDMKIPFPGDIVEI 358
            |.|  .|.:....:||.|:.|.  :|.::          :..:|.::.......|  ||....|.
plant   250 DNVFGTDPSEVHIHVRRVLLKE--IPANEAESSAWLMDSFKLKDKLLSDFNAQGK--FPNQRPEE 310

  Fly   359 ERTIEKLGLNESQRDAELCKGFLRLSNTDRLDIITFGELLQ-------VDLKNTDLHKLFALLDH 416
            |.::.|            |             |.||..::.       :.|.:....|::|.|  
plant   311 ELSVLK------------C-------------IATFAGVISLTVVFIYLTLYSHSCFKVYACL-- 348

  Fly   417 RRSGTVSLKSFLLCSLF--------------CKLKN 438
              |||     :|..:.:              ||:||
plant   349 --SGT-----YLTFATYYKFQPSPGCFREDSCKVKN 377

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
LPCATNP_001036265.1 LPLAT_LPCAT1-like 126..338 CDD:153253 47/236 (20%)
FRQ1 401..>505 CDD:444056 12/52 (23%)
EF-hand_8 455..507 CDD:404678
LPAT4NP_565098.1 PLN02510 7..378 CDD:178126 86/426 (20%)
Blue background indicates that the domain is not in the aligned region.

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