DRSC/TRiP Functional Genomics Resources

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Protein Alignment LPCAT and Aup1

DIOPT Version :9

Sequence 1:NP_001036265.1 Gene:LPCAT / 31899 FlyBaseID:FBgn0052699 Length:533 Species:Drosophila melanogaster
Sequence 2:NP_001073368.1 Gene:Aup1 / 680423 RGDID:1591777 Length:410 Species:Rattus norvegicus


Alignment Length:471 Identity:99/471 - (21%)
Similarity:173/471 - (36%) Gaps:126/471 - (26%)


- Green bases have known domain annotations that are detailed below.


  Fly    60 DSHIEVAKIYVLTVLLLPIRVVGCVLSL-----ISAWMFACIGLYGMTLDDLKAKPLTGWRKQMQ 119
            |||...:..::|..|||...|..|:|.|     :..::.:|            |.|.:..|: ..
  Rat    14 DSHRLPSDGFLLLALLLYAPVGLCLLVLRLFLGLHVFLVSC------------ALPDSVLRR-FV 65

  Fly   120 YMTACGMRMVYTFGSFHYVTMKGRAATAKEAPI------LVVAPHSSYVDSILVVASGPPSIVAK 178
            ..|.|              .:.|..|..:::.:      ::::.|.:..|.         :||..
  Rat    66 VRTMC--------------AVLGLVARQEDSGLRDHRVRVLISNHVTPFDH---------NIVNL 107

  Fly   179 RETADIPLLGKIINYAQPIYVQRE----DPNSRQNTIRDIVDRARSTDDWP-QVVIFAEGTCTN- 237
            ..|...|||.     :.|.:|...    :.:.|...:..:.....||...| .:::|.|...|| 
  Rat   108 LTTCSTPLLN-----SPPSFVCWSRGFMEMDRRVELVESLKKFCASTRLPPTPLLLFPEEEATNG 167

  Fly   238 RTALIKFKPGAFYPGVPVQPVLLKYPNKYDTFTWTWDGPGVLRLLWLTMTQF--YNRCEIEYLPV 300
            |..|::|....|.....|||:.|:......:.|.: |...|..|||.....|  |   ::.:|  
  Rat   168 REGLLRFSSWPFSIQDVVQPLTLQVQRPLVSVTVS-DASWVSELLWSLFVPFTVY---QVRWL-- 226

  Fly   301 YTPSEDEVADAN-LYANNVREVMAKALG-VPTSDYSFEDVIVMSRARDMKI------------PF 351
             .|...::.:.| .:|..|::::||.|| :.|.....:....|.|.|..::            |.
  Rat   227 -HPIRRQLGEENEEFALRVQQLVAKELGQIGTRLTPADKAEHMKRQRHPRLRPQSVQSSFPSPPS 290

  Fly   352 PGDIVE-------IERTIEKLGLNESQRDAELCKGFLRLSNTDRLDIITFGELLQ--VDLKNTDL 407
            |...|:       ::..:..:.||..|||         |:.|..:| :|...||:  |.....|:
  Rat   291 PSSDVQLTILAQRVKEVLPHVPLNVIQRD---------LARTGCVD-LTITNLLEGAVAFMPEDV 345

  Fly   408 HKLFALLDHRRSGTVSLKSFLLCSLFCKLKNSDL-------LTFLRALIHLYSESSQQIDRESFV 465
                      ..|:.||.:    :...|..:|.|       |||.::     |.:.|:..:|...
  Rat   346 ----------TEGSQSLPT----ASAPKFPSSGLVTPQPTALTFAKS-----SWARQESLQERKQ 391

  Fly   466 RLMRHAGGKLNEQKAQ 481
            .|..:|..:..|::||
  Rat   392 ALYEYARRRFRERQAQ 407

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
LPCATNP_001036265.1 PlsC 87..>265 CDD:223282 35/194 (18%)
LPLAT_LPCAT1-like 126..338 CDD:153253 46/227 (20%)
EF-hand_8 455..507 CDD:290545 7/27 (26%)
Aup1NP_001073368.1 LPLAT 66..264 CDD:302626 48/232 (21%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 259..293 5/33 (15%)
CUE_AUP1 300..340 CDD:270603 12/49 (24%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 348..367 6/22 (27%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0204
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.900

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