DRSC/TRiP Functional Genomics Resources

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Protein Alignment LPCAT and Agpat2

DIOPT Version :9

Sequence 1:NP_001036265.1 Gene:LPCAT / 31899 FlyBaseID:FBgn0052699 Length:533 Species:Drosophila melanogaster
Sequence 2:NP_080488.1 Gene:Agpat2 / 67512 MGIID:1914762 Length:278 Species:Mus musculus


Alignment Length:243 Identity:56/243 - (23%)
Similarity:98/243 - (40%) Gaps:63/243 - (25%)


- Green bases have known domain annotations that are detailed below.


  Fly    71 LTVLLLPIRV---------VG--CV--LSLISAWMFACIGLY-GMTLDDLKAKPLTGWRKQMQYM 121
            |.:|||.:::         ||  ||  ||..:|....|:..: |.|:|::.   :..|..:    
Mouse    11 LLLLLLLVQLSRTARFYAKVGLYCVLCLSFSAAASIVCLLRHGGRTVDNMS---IISWFVR---- 68

  Fly   122 TACGMRMVYTFGSFHYV-----TMKGRAATAKEAPILVVAPHSSYVDSILVVASGPPSIV--AKR 179
                        ||.||     .:.|:.....:.|.::::.|.|.:|.:.::...|...|  |||
Mouse    69 ------------SFKYVYGLRFEVSGQKKLEVDGPCVIISNHQSILDMMGLMEILPKRCVQIAKR 121

  Fly   180 ETADIPLLGKIINYAQPIYVQREDPNSRQNTIRDIVDRARSTDDWPQVVIFAEGTCTNRTALIKF 244
            |......:|.|:......::.|:...:..:.:.|:.|  ....:..:|.|:.|||..:...|:.|
Mouse   122 ELMFTGPVGLIMYLGGVYFINRQQARTAMSVMADLGD--LMVKENLKVWIYPEGTRNDNGDLLPF 184

  Fly   245 KPGAFYPGVPVQ-PVLLKYPNKYDTFTWTWDGPGVLRLLWLTMTQFYN 291
            |.||||..:..| |::   |..|.:|                 :.|||
Mouse   185 KKGAFYLAIQAQVPII---PVVYSSF-----------------SSFYN 212

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
LPCATNP_001036265.1 PlsC 87..>265 CDD:223282 41/186 (22%)
LPLAT_LPCAT1-like 126..338 CDD:153253 40/174 (23%)
EF-hand_8 455..507 CDD:290545
Agpat2NP_080488.1 PlsC 30..259 CDD:223282 52/224 (23%)
LPLAT_AGPAT-like 67..240 CDD:153251 40/184 (22%)
HXXXXD motif. /evidence=ECO:0000250|UniProtKB:Q9D517 98..103 2/4 (50%)
EGTR motif. /evidence=ECO:0000250|UniProtKB:O15120 172..175 2/2 (100%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0204
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.810

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