DRSC/TRiP Functional Genomics Resources

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Protein Alignment LPCAT and Agpat1

DIOPT Version :9

Sequence 1:NP_001036265.1 Gene:LPCAT / 31899 FlyBaseID:FBgn0052699 Length:533 Species:Drosophila melanogaster
Sequence 2:NP_001156851.1 Gene:Agpat1 / 55979 MGIID:1932075 Length:285 Species:Mus musculus


Alignment Length:266 Identity:59/266 - (22%)
Similarity:102/266 - (38%) Gaps:62/266 - (23%)


- Green bases have known domain annotations that are detailed below.


  Fly    68 IYVLTVLLLPIRVVGCVLSLISAWMFACIGLYGMTLDDLKAKPLTGWRKQMQYMTACGMRMVYTF 132
            |..|.:|.:|:    |.:.             |..::::|...|.....:..|    |:| |...
Mouse    42 ILFLAILAIPV----CAVR-------------GRNVENMKILRLLLLHVKYLY----GIR-VEVR 84

  Fly   133 GSFHYVTMKGRAATAKEAPILVVAPHSSYVDSILVVASGPPSIV--AKRETADIPLLGKIINYAQ 195
            |:.|:...:         |.:||:.|.|.:|.:.::...|...|  ||||.......|.....|.
Mouse    85 GAHHFPPTQ---------PYVVVSNHQSSLDLLGMMEVLPDRCVPIAKRELLWAGSAGLACWLAG 140

  Fly   196 PIYVQREDPNSRQNTIRDIVDRARSTDDWPQVVIFAEGTCTNRTALIKFKPGAFY----PGVPVQ 256
            .|::.|:......:.:.::.....:.|  .:|.:|.|||..:..:::.||.|||:    ..||:.
Mouse   141 IIFIDRKRTGDAISVMSEVAQTLLTQD--VRVWVFPEGTRNHNGSMLPFKRGAFHLAVQAQVPII 203

  Fly   257 PVLLK-----YPNKYDTFTWTWDGPGVLRLLWLTMTQFYNRCEIEYLPVYTPSEDEVADANLYAN 316
            |:::.     |..|...||    .||              ||::..||..:.......|....|:
Mouse   204 PIVMSSYQDFYSKKERRFT----SPG--------------RCQVRVLPPVSTEGLTPDDVPALAD 250

  Fly   317 NVREVM 322
            :||..|
Mouse   251 SVRHSM 256

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
LPCATNP_001036265.1 PlsC 87..>265 CDD:223282 40/188 (21%)
LPLAT_LPCAT1-like 126..338 CDD:153253 49/208 (24%)
EF-hand_8 455..507 CDD:290545
Agpat1NP_001156851.1 LPLAT_AGPAT-like 66..253 CDD:153251 49/220 (22%)
HXXXXD motif. /evidence=ECO:0000250|UniProtKB:Q9D517 101..106 2/4 (50%)
EGTR motif. /evidence=ECO:0000250|UniProtKB:Q99943 175..178 2/2 (100%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0204
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.810

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