DRSC/TRiP Functional Genomics Resources

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Protein Alignment LPCAT and lpcat2

DIOPT Version :9

Sequence 1:NP_001036265.1 Gene:LPCAT / 31899 FlyBaseID:FBgn0052699 Length:533 Species:Drosophila melanogaster
Sequence 2:NP_001018492.1 Gene:lpcat2 / 553683 ZFINID:ZDB-GENE-050522-229 Length:529 Species:Danio rerio


Alignment Length:464 Identity:177/464 - (38%)
Similarity:269/464 - (57%) Gaps:28/464 - (6%)


- Green bases have known domain annotations that are detailed below.


  Fly    50 INPFVHRIEIDSHIEVAKIYVLTVLLLPIRVVGCVLSLISAWMFACIGLYGMTLDDLKAKPLTGW 114
            ||||||.:.: |..::.|.::|.::|:|:|.:..:|.|:..|..:.|..:|.:|..: .:|:|||
Zfish    22 INPFVHDLSL-STADITKCFLLGIILVPLRAIFLLLVLLVMWPVSVIITFGQSLKGV-VEPMTGW 84

  Fly   115 RK--QMQYMTACGMRMVYTFGSFHYVTMKGRAATAKEAPILVVAPHSSYVDSILVVASGPPSIVA 177
            |:  ..:.||..| || |.||....|.:||:.|:..|||||.||||||:.|:|..:.||.||.|:
Zfish    85 RRFLHRRVMTFLG-RM-YFFGMGFKVVVKGKKASTLEAPILAVAPHSSFFDAIACIESGLPSTVS 147

  Fly   178 KRETADIPLLGKIINYAQPIYVQREDPNSRQNTIRDIVDRARSTDDWPQVVIFAEGTCTNRTALI 242
            :.|:.:.|:.|:.:...||:.|.|.||:||:|||.:|..||:|...||||:||.|||||||:.||
Zfish   148 RIESLEAPIFGRFLRCVQPVLVSRTDPDSRRNTIIEIERRAKSGGHWPQVLIFPEGTCTNRSCLI 212

  Fly   243 KFKPGAFYPGVPVQPVLLKYPNKYDTFTWTWDGPGVLRLLWLTMTQFYNRCEIEYLPVYTPSEDE 307
            .||.|.|.|||||||||::||||.||.||||.||...|||.||:.|.....|:|:||...|:|.|
Zfish   213 TFKQGGFVPGVPVQPVLIRYPNKLDTVTWTWQGPKSARLLLLTLCQLCTTVEVEFLPPQVPTEME 277

  Fly   308 VADANLYANNVREVMAKALGVPTSDYSFEDVIVMSRARDMKIPFPGDIVEIERTIEKLGLNESQR 372
            ......:|.:||.||||:|.:|.:|:::||..:|..|.::.:|....:||..:...||.|.....
Zfish   278 KKCPLKFAQSVRAVMAKSLKLPVTDHTYEDCRLMIAAGELTLPMEAGLVEFTKISRKLELKWDNV 342

  Fly   373 DAEL---------CKGFLRLSNTDRLDIITFGELLQVDLKNTDLHKLFALLDHRRSGTVSLKSFL 428
            ..||         |||       .|:.:..|...|::.: :..|.:||||.|....||:..:.::
Zfish   343 KKELESFANIACSCKG-------GRITVEEFASFLKLPI-SPALQQLFALFDRNGDGTIDFREYV 399

  Fly   429 L-CSLFCKLKNSDLLTFLRALIHLYS-ESSQQIDRESFVRLMRHAGGKLNEQKAQALFYALDTDN 491
            : .::.|:..|::  ..::....|:. :....|.:|.|..|:|.|.| :.:....:||..:|.|.
Zfish   400 IGVTVLCRPANNE--EVIQTAFKLFDIDEDNCITQEEFSSLLRSALG-VCDLDVHSLFREIDADG 461

  Fly   492 LGYVSFDSF 500
            .|::::|.|
Zfish   462 SGHITYDEF 470

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
LPCATNP_001036265.1 PlsC 87..>265 CDD:223282 88/179 (49%)
LPLAT_LPCAT1-like 126..338 CDD:153253 109/211 (52%)
EF-hand_8 455..507 CDD:290545 14/46 (30%)
lpcat2NP_001018492.1 PlsC 49..297 CDD:223282 120/250 (48%)
LPLAT_LPCAT1-like 98..309 CDD:153253 110/211 (52%)
HXXXXD motif. /evidence=ECO:0000250|UniProtKB:Q3TFD2 128..133 3/4 (75%)
EGTC motif 202..205 2/2 (100%)
EFh 316..406 CDD:298682 22/97 (23%)
EFh 378..440 CDD:238008 15/63 (24%)
EF-hand_7 378..435 CDD:290234 13/58 (22%)
EF-hand_7 415..473 CDD:290234 15/57 (26%)
EFh 418..473 CDD:238008 15/54 (28%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C170596103
Domainoid 1 1.000 53 1.000 Domainoid score I11371
eggNOG 1 0.900 - - E1_COG0204
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 315 1.000 Inparanoid score I2537
OMA 1 1.010 - - QHG58407
OrthoDB 1 1.010 - - D1266853at2759
OrthoFinder 1 1.000 - - FOG0001365
OrthoInspector 1 1.000 - - otm26059
orthoMCL 1 0.900 - - OOG6_100894
Panther 1 1.100 - - LDO PTHR23063
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X772
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
ZFIN 00.000 Not matched by this tool.
1413.770

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