DRSC/TRiP Functional Genomics Resources

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Protein Alignment LPCAT and agpat3

DIOPT Version :9

Sequence 1:NP_001036265.1 Gene:LPCAT / 31899 FlyBaseID:FBgn0052699 Length:533 Species:Drosophila melanogaster
Sequence 2:NP_998590.1 Gene:agpat3 / 406734 ZFINID:ZDB-GENE-040426-2765 Length:377 Species:Danio rerio


Alignment Length:176 Identity:35/176 - (19%)
Similarity:69/176 - (39%) Gaps:34/176 - (19%)


- Green bases have known domain annotations that are detailed below.


  Fly    84 VLSLISAWMFACIGLYGMTLDDLKAKPLTGWRKQMQYMTACGMRMVYTFGSFHYVTMKGRAAT-- 146
            ||.|:..::|...||. :....|....|  |....|.......|:.|:..|...:.::..:.|  
Zfish    12 VLQLLIGFVFVVSGLI-INFTQLCTCVL--WPFDKQLYRRINTRLSYSLWSQLVMLLEWWSGTEC 73

  Fly   147 ------------AKEAPILVVAPHSSYVD-----------SILVVASGPPSIVAKRETADIPLLG 188
                        .|| .::::..|:..||           .:|    |...::||.|...:||:|
Zfish    74 TLYTDQATVDKFGKE-HVIIILNHNFEVDFLCGWTICERYGVL----GSSKVLAKHELLKVPLIG 133

  Fly   189 KIINYAQPIYVQREDPNSRQNTIRDIVDRARSTDDWPQVVIFAEGT 234
            ....:.:.::.:|:....| :|:...:.|.|...::...:::.|||
Zfish   134 WTWYFLEIVFCKRKWEEDR-DTVFSGLSRLRDYPEYMWFLLYCEGT 178

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
LPCATNP_001036265.1 PlsC 87..>265 CDD:223282 33/173 (19%)
LPLAT_LPCAT1-like 126..338 CDD:153253 25/134 (19%)
EF-hand_8 455..507 CDD:290545
agpat3NP_998590.1 PLN02380 12..377 CDD:178006 35/176 (20%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0204
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
10.900

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