DRSC/TRiP Functional Genomics Resources

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Protein Alignment LPCAT and agpat4

DIOPT Version :9

Sequence 1:NP_001036265.1 Gene:LPCAT / 31899 FlyBaseID:FBgn0052699 Length:533 Species:Drosophila melanogaster
Sequence 2:NP_998157.1 Gene:agpat4 / 406265 ZFINID:ZDB-GENE-040426-1924 Length:377 Species:Danio rerio


Alignment Length:190 Identity:41/190 - (21%)
Similarity:76/190 - (40%) Gaps:44/190 - (23%)


- Green bases have known domain annotations that are detailed below.


  Fly    75 LLPIRVVGCVLSLISAWMFACIGLYGMTLDDLKAKPLTGWRKQMQYMTACGMRMVYTFGSFHYVT 139
            ||.:.....:..||..::|...|:. :.|..|...||....||:.....|  |:.|:..|.....
Zfish     3 LLKVLKTQLLCHLIICYVFLVSGII-INLLQLCTLPLWPINKQLARKINC--RLGYSIASQLVAL 64

  Fly   140 MK---GRAATAKEAP----------ILVVAPHSSYVD-----------SILVVASGPPSIVAKRE 180
            ::   |...|....|          .:||..|:..:|           .:|    |...::||:|
Zfish    65 LEWWSGTECTLYTDPESFRLYGKENAIVVLNHNFEIDFMTGWTFCERFGVL----GSSKVLAKKE 125

  Fly   181 TADIPLLGKIINYAQPIYVQR---EDPNSRQNTIRDIVDRARSTDDWPQ---VVIFAEGT 234
            .:.:|::|.:..:.:.::.:|   ||.|:       :|...|:..|:|:   .::..|||
Zfish   126 LSFVPVIGWMWYFLEIVFCKRKWEEDRNT-------VVQSLRNLQDYPEFFWFLLHCEGT 178

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
LPCATNP_001036265.1 PlsC 87..>265 CDD:223282 39/178 (22%)
LPLAT_LPCAT1-like 126..338 CDD:153253 28/139 (20%)
EF-hand_8 455..507 CDD:290545
agpat4NP_998157.1 PLN02380 20..320 CDD:178006 37/173 (21%)
LPLAT_LCLAT1-like 62..256 CDD:153252 25/128 (20%)
Acyltransf_C 243..314 CDD:292694
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0204
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
10.900

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