DRSC/TRiP Functional Genomics Resources

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Protein Alignment LPCAT and agpat4

DIOPT Version :10

Sequence 1:NP_001036265.1 Gene:LPCAT / 31899 FlyBaseID:FBgn0052699 Length:533 Species:Drosophila melanogaster
Sequence 2:NP_998157.2 Gene:agpat4 / 406265 ZFINID:ZDB-GENE-040426-1924 Length:380 Species:Danio rerio


Alignment Length:187 Identity:38/187 - (20%)
Similarity:76/187 - (40%) Gaps:38/187 - (20%)


- Green bases have known domain annotations that are detailed below.


  Fly    75 LLPIRVVGCVLSLISAWMFACIGLYGMTLDDLKAKPLTGWRKQMQYMTACGMRMVYTFGSFHYVT 139
            ||.:.....:..||..::|...|:. :.|..|...||....||:.....|  |:.|:..|.....
Zfish     6 LLKVLKTQLLCHLIICYVFLVSGII-INLLQLCTLPLWPINKQLARKINC--RLGYSIASQLVAL 67

  Fly   140 MK---GRAATAKEAP----------ILVVAPHSSYVD-----------SILVVASGPPSIVAKRE 180
            ::   |...|....|          .:||..|:..:|           .:|    |...::||:|
Zfish    68 LEWWSGTECTLYTDPESFRLYGKENAIVVLNHNFEIDFMTGWTFCERFGVL----GSSKVLAKKE 128

  Fly   181 TADIPLLGKIINYAQPIYVQREDPNSRQNTIRDIVDRARSTDDWPQ---VVIFAEGT 234
            .:.:|::|.:..:.:.::.:|:....|:..::.:    |:..|:|:   .::..|||
Zfish   129 LSFVPVIGWMWYFLEIVFCKRKWEEDRKTVVQSL----RNLQDYPEFFWFLLHCEGT 181

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
LPCATNP_001036265.1 LPLAT_LPCAT1-like 126..338 CDD:153253 25/136 (18%)
FRQ1 401..>505 CDD:444056
EF-hand_8 455..507 CDD:404678
agpat4NP_998157.2 PLN02380 23..323 CDD:178006 34/170 (20%)
Blue background indicates that the domain is not in the aligned region.

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