DRSC/TRiP Functional Genomics Resources

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Protein Alignment LPCAT and tmem68

DIOPT Version :10

Sequence 1:NP_001036265.1 Gene:LPCAT / 31899 FlyBaseID:FBgn0052699 Length:533 Species:Drosophila melanogaster
Sequence 2:NP_956786.1 Gene:tmem68 / 393464 ZFINID:ZDB-GENE-040426-1267 Length:331 Species:Danio rerio


Alignment Length:289 Identity:54/289 - (18%)
Similarity:90/289 - (31%) Gaps:95/289 - (32%)


- Green bases have known domain annotations that are detailed below.


  Fly    40 DTWASKGY--NYINPFVHRIEIDSHIEVAKIY-VLTVLLLPIRVV-------------------- 81
            :.||..|.  :|:|...:.:.:.:.:.|..|. .|.|:||.:.::                    
Zfish    26 EEWAGLGQIEDYLNFLEYLVWVFTPLVVVFILPFLIVILLYLSILFLHVYKRKNQLREAYSNNLW 90

  Fly    82 -GCVLSLISAWMFACIGLYGMTLDDLKAKPLTGWRKQMQYMTACGMRMVYTFGSFHYVTMKGRAA 145
             |...:|.:.|.......:|..:..|...|..|....:.|..|..:...|...:  .:..|||..
Zfish    91 DGARKTLATLWDGHGAIWHGYEIHGLDKIPDEGPALIVYYHGAIPVDYYYFLAT--VIIQKGRTC 153

  Fly   146 TAKEAPILVVAPHSSYVDSILVVASGP-----------------PSIVAKRETAD--IPLL-GKI 190
            .:.....|...|....:..:..|..||                 |..|.:...:|  .||| ||.
Zfish   154 HSVADHFLFKVPGFKLLLEVFSVIHGPQEECVRALRNGHLLGISPGGVREALFSDETYPLLWGKR 218

  Fly   191 INYAQ----------PIYVQREDPNSRQ-----NTIRDIVDRARSTDDWPQVVIFAEGTCTNRTA 240
            ..:||          |::.|    |.|:     .|:|..                       |..
Zfish   219 KGFAQVAIDSKVPVIPMFTQ----NLREGFRSLGTLRFF-----------------------RWV 256

  Fly   241 LIKFKPGAFYPGVPVQPVLLKYPNKYDTF 269
            ..:|:       :||.|:...:|.|:.||
Zfish   257 YERFR-------LPVAPIYGGFPVKFRTF 278

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
LPCATNP_001036265.1 LPLAT_LPCAT1-like 126..338 CDD:153253 34/179 (19%)
FRQ1 401..>505 CDD:444056
EF-hand_8 455..507 CDD:404678
tmem68NP_956786.1 LPLAT_MGAT-like 104..311 CDD:153249 40/211 (19%)
Blue background indicates that the domain is not in the aligned region.

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