DRSC/TRiP Functional Genomics Resources

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Protein Alignment LPCAT and Agpat2

DIOPT Version :10

Sequence 1:NP_001036265.1 Gene:LPCAT / 31899 FlyBaseID:FBgn0052699 Length:533 Species:Drosophila melanogaster
Sequence 2:NP_609231.2 Gene:Agpat2 / 34176 FlyBaseID:FBgn0026718 Length:271 Species:Drosophila melanogaster


Alignment Length:257 Identity:62/257 - (24%)
Similarity:107/257 - (41%) Gaps:58/257 - (22%)


- Green bases have known domain annotations that are detailed below.


  Fly    80 VVG--CVLSLI-SAW-------------------MFACIGLYGMTLDDLKAKPLTGWRKQMQYMT 122
            |:|  ||::|| ||.                   :|.|:....:...|.:......|        
  Fly     7 VIGLACVVALILSATAKAPYQMRMFFIFFGAGLIVFLCVPFMILRPRDYRNALFPSW-------- 63

  Fly   123 ACGMRMVYTFGSFHYVTM--KGRAATAKEAPILVVAPHSSYVDSILVVA-----SGPPSIVAKRE 180
             |..::....|    :||  :|.....|:...:|:..|.|.|| :.|:|     .|..::|:|:|
  Fly    64 -CFRQLCRLVG----ITMEVRGLENVRKDHGAVVIMNHQSAVD-LCVLAYLWPVIGRATVVSKKE 122

  Fly   181 TADIPLLGKIINYAQPIYVQR----EDPNSRQNTIRDIVDRARSTDDWPQVVIFAEGTCTNRTAL 241
            ...||..|........:|:.|    :..||.|...:.|.:|.      .::::|.|||..::.:|
  Fly   123 VLYIPFFGIGAWLWGTLYIDRSRKTDSINSLQKEAKAIQERN------CKLLLFPEGTRNSKDSL 181

  Fly   242 IKFKPGAFYPGV----PVQPVLL-KYPNKYDTFTWTWDGPGVLRLLWLTMTQFYNRCEIEYL 298
            :.||.|:|:..:    |||||:: ||....|.......|..::.:|....|:.|.|.:::.|
  Fly   182 LPFKKGSFHIALQGKSPVQPVVISKYSFMDDEKKTFRPGHALIHILPEVSTEKYKREDVQLL 243

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
LPCATNP_001036265.1 LPLAT_LPCAT1-like 126..338 CDD:153253 49/189 (26%)
FRQ1 401..>505 CDD:444056
EF-hand_8 455..507 CDD:404678
Agpat2NP_609231.2 PlsC 47..261 CDD:439974 52/217 (24%)
Blue background indicates that the domain is not in the aligned region.

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