DRSC/TRiP Functional Genomics Resources

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Protein Alignment LPCAT and Lpgat1

DIOPT Version :9

Sequence 1:NP_001036265.1 Gene:LPCAT / 31899 FlyBaseID:FBgn0052699 Length:533 Species:Drosophila melanogaster
Sequence 2:NP_001128301.1 Gene:Lpgat1 / 226856 MGIID:2446186 Length:409 Species:Mus musculus


Alignment Length:217 Identity:41/217 - (18%)
Similarity:75/217 - (34%) Gaps:97/217 - (44%)


- Green bases have known domain annotations that are detailed below.


  Fly     4 STIKPTGGDEVPPAGVVGNVADVGVAASLTKRDSEEDTWASKGYNYINPFV--------HRIEID 60
            |.:.||..|.          .|..|..::|   .||..|.  |:......:        :.:.|.
Mouse    24 SPLAPTEKDR----------TDANVRMAVT---VEEAPWL--GWIVAKALMRFAFMVANNLVAIP 73

  Fly    61 SHIEVAKIYVLTVLLLPIRVVGC-------------VLSLISAWMFACIGLY-GMTL----DDLK 107
            |:|    .||  ::|.|:||:..             :|.::::|     |.| |.|:    :|:|
Mouse    74 SYI----CYV--IILQPLRVLDSKRFWYIEGLMYKWLLGMVASW-----GWYAGYTVMEWGEDIK 127

  Fly   108 A----------------------------KPLTGWRKQMQYMTACGMRMVYTFGSFHYVTM---- 140
            |                            .|:..   ||.::    |..::.:.:|..|::    
Mouse   128 AIAKDEAVMLVNHQATGDVCTLMMCLQDKGPVVA---QMMWL----MDHIFKYTNFGIVSLIHGD 185

  Fly   141 ----KGRAATAKEAPILVVAPH 158
                :|||  .::..:||:..|
Mouse   186 FFIRQGRA--YRDQQLLVLKKH 205

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
LPCATNP_001036265.1 PlsC 87..>265 CDD:223282 20/113 (18%)
LPLAT_LPCAT1-like 126..338 CDD:153253 9/41 (22%)
EF-hand_8 455..507 CDD:290545
Lpgat1NP_001128301.1 LPLAT_LCLAT1-like 108..324 CDD:153252 20/112 (18%)
Acyltransf_C 313..382 CDD:374349
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0204
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.900

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