DRSC/TRiP Functional Genomics Resources

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Protein Alignment LPCAT and M79.2

DIOPT Version :9

Sequence 1:NP_001036265.1 Gene:LPCAT / 31899 FlyBaseID:FBgn0052699 Length:533 Species:Drosophila melanogaster
Sequence 2:NP_509781.2 Gene:M79.2 / 187470 WormBaseID:WBGene00010902 Length:441 Species:Caenorhabditis elegans


Alignment Length:350 Identity:74/350 - (21%)
Similarity:148/350 - (42%) Gaps:86/350 - (24%)


- Green bases have known domain annotations that are detailed below.


  Fly     2 TTSTIKPTGGDEVPPAGVVGNVADVGVAASLTKRDSEEDTWASKGYNYINPFVHRIEIDSHIEVA 66
            |..||:||....:|                       |..|.|              .:..|..|
 Worm    93 TAPTIRPTLLGMMP-----------------------EKNWNS--------------TEKAIFFA 120

  Fly    67 KIYVLTVLLLPIRVVGCVLSLISAWMFACIGLYGM-----TLDDLKAKPLTGWRKQMQYMTACG- 125
            .:......|:|:||  |:  |:::::|  :.|.|:     ||.|.:..    |...:.....|| 
 Worm   121 GLIFRIFFLMPVRV--CL--LLTSFVF--VALAGLQTAFRTLSDREKT----WVAIVYCRLFCGS 175

  Fly   126 MRMVYTFGSFHYVTMKGRAATAKEAPILVVAPHSSYVDSILVVASGPPS-------IVAKRETAD 183
            |.:|..:.:..:...|         |.:.|:.|.:..| |.::.:|.|.       :..::....
 Worm   176 MGLVANYRNPQFRPKK---------PGVAVSNHLTPND-IQILWAGTPHGSSYGYVVTGQKHKGI 230

  Fly   184 IPLLGKIINYAQP-IYVQREDPNSRQNTIRDIVDRARSTDDWPQVVIFAEGTCTNRTALIKFKPG 247
            |.::..::....| ::::|:..|.||..:.:::..|:.  :.| |::|.||.|:|.:.:::|:..
 Worm   231 IGIIEHLVEKLCPSLWLERKCSNERQGFLAEVMKIAKR--EGP-VLLFPEGYCSNNSKVLQFRKA 292

  Fly   248 AFYPGVPVQPVLLKYPNKYDTFTWTWDG--PGVLRLL--WLTMTQFYNRCEIEYLPVYTPSEDEV 308
            .|...|.:.||.:|...::....|..|.  ..::|::  |..:      .:|:|||:....|.| 
 Worm   293 IFEENVNIYPVAIKQSPEFGDGFWYEDEFFQYLVRIMLNWAVV------YDIQYLPMEVRKEHE- 350

  Fly   309 ADANLYANNVREVMAKALGVPTSDY 333
             :.:|:|..:::|:|.|.|:|:.:|
 Worm   351 -NNSLFAARIQQVIANAAGIPSCEY 374

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
LPCATNP_001036265.1 PlsC 87..>265 CDD:223282 40/191 (21%)
LPLAT_LPCAT1-like 126..338 CDD:153253 47/219 (21%)
EF-hand_8 455..507 CDD:290545
M79.2NP_509781.2 LPLAT_LPCAT1-like 169..378 CDD:153253 49/226 (22%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0204
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.810

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