DRSC/TRiP Functional Genomics Resources

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Protein Alignment LPCAT and acl-13

DIOPT Version :9

Sequence 1:NP_001036265.1 Gene:LPCAT / 31899 FlyBaseID:FBgn0052699 Length:533 Species:Drosophila melanogaster
Sequence 2:NP_502370.1 Gene:acl-13 / 184203 WormBaseID:WBGene00008581 Length:363 Species:Caenorhabditis elegans


Alignment Length:59 Identity:15/59 - (25%)
Similarity:24/59 - (40%) Gaps:13/59 - (22%)


- Green bases have known domain annotations that are detailed below.


  Fly   462 ESFVRLMRHAGGKLNEQKAQALFYAL--------DTDNLGYVSFDSFVELTEKQKSSYK 512
            |.|:...|:.||     |..|:.|.:        |.:.|....||.:.:..:..:|.||
 Worm   268 EIFMSAWRNGGG-----KPFAIHYEIFKMDPKWKDEEELKNFLFDRYQKKDKLLESYYK 321

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
LPCATNP_001036265.1 PlsC 87..>265 CDD:223282
LPLAT_LPCAT1-like 126..338 CDD:153253
EF-hand_8 455..507 CDD:290545 12/52 (23%)
acl-13NP_502370.1 LPLAT 78..286 CDD:388412 7/22 (32%)
Acyltransf_C 279..>328 CDD:374349 11/48 (23%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0204
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.900

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