DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment LPCAT and acl-12

DIOPT Version :9

Sequence 1:NP_001036265.1 Gene:LPCAT / 31899 FlyBaseID:FBgn0052699 Length:533 Species:Drosophila melanogaster
Sequence 2:NP_509260.1 Gene:acl-12 / 181001 WormBaseID:WBGene00015295 Length:391 Species:Caenorhabditis elegans


Alignment Length:385 Identity:72/385 - (18%)
Similarity:125/385 - (32%) Gaps:144/385 - (37%)


- Green bases have known domain annotations that are detailed below.


  Fly    54 VHRIEID---SHIEVAKIYVLTVLLLPIRVVGCVL--SLISAWMFACIGLYGMTLDDLKAKPLTG 113
            ||.|||.   |.:..|..:.:|..::|   |.||:  ||:...|.....|:......|.|.....
 Worm    30 VHLIEIRRIISLVGAAYFFFMTAWVVP---VACVITVSLLFPLMLFSTPLFNYLEHKLCAMVNAH 91

  Fly   114 WRKQMQYMTACGMRMVYTFGSFHYVTMKGRAATAKEAPILVVAPHSSYVDSILVVAS--GPPSIV 176
            |.....::.|    .|..:|:    .:.|.|    |...|::|.|...:|..:::.|  |..||.
 Worm    92 WNAVSVFVGA----TVTEYGT----NLAGYA----EEKCLLLANHLGLLDHFVLMQSLNGKGSIR 144

  Fly   177 AKRETADIPLLGKIINYAQPIY-----------------------VQREDPNSRQNTIRDIVDRA 218
            ::              :...||                       |.:.|  |..::.||.:..:
 Worm   145 SR--------------WMWVIYNIWKYTPLGVMWTSHGNFFVNGGVSKRD--SVLSSFRDHLKNS 193

  Fly   219 RSTDDWPQVVIFAEGTCTNRTALIK-----------FKP--GAFYP------------------- 251
            ....|:..|:::.||   :|..|:|           .||  ...||                   
 Worm   194 FYKYDYGWVIMYPEG---SRLYLVKNSGRTFAEKNGLKPLDNCVYPRTGAAHAVLDVLGPTDDSL 255

  Fly   252 -------GVPVQPVL---LKY-----PNKYDTFTWTWDGPGVLRLLWLTMTQFYNRCEIEYLPVY 301
                   |.|::.::   :.|     |:..|.....|:.        :..:||....::      
 Worm   256 SMSKCGKGEPIKYIIDATIGYRKGAVPDICDVMMGDWES--------VEASQFAVHYDV------ 306

  Fly   302 TPSEDEVADANLYANNVREVMAKALGVPTSDYSFEDVIVMSR--ARDMKI-PFPGDIVEI 358
            .|.:.|.:|.||                ..::.:|..|:..:  |...|. .||||..::
 Worm   307 IPVKPEWSDENL----------------LKEFLYERYIIKDKLLAEFYKTGHFPGDKTKV 350

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
LPCATNP_001036265.1 PlsC 87..>265 CDD:223282 42/249 (17%)
LPLAT_LPCAT1-like 126..338 CDD:153253 45/283 (16%)
EF-hand_8 455..507 CDD:290545
acl-12NP_509260.1 LPLAT <156..290 CDD:302626 21/138 (15%)
Acyltransf_C 302..364 CDD:292694 13/71 (18%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0204
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.900

Return to query results.
Submit another query.