DRSC/TRiP Functional Genomics Resources

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Protein Alignment LPCAT and F44B9.5

DIOPT Version :9

Sequence 1:NP_001036265.1 Gene:LPCAT / 31899 FlyBaseID:FBgn0052699 Length:533 Species:Drosophila melanogaster
Sequence 2:NP_498746.1 Gene:F44B9.5 / 176127 WormBaseID:WBGene00018408 Length:390 Species:Caenorhabditis elegans


Alignment Length:419 Identity:91/419 - (21%)
Similarity:147/419 - (35%) Gaps:111/419 - (26%)


- Green bases have known domain annotations that are detailed below.


  Fly    15 PPAGVVGNVADVGVAASLTKRDSEEDTWASKGYNYINPFVHRIEIDSHIEVAKIYVLTVLLLPIR 79
            |.|...||..|:.: ..|..:...|||                       :|||:  :::..|  
 Worm     4 PEASSSGNTEDLRI-EDLFHQKRNEDT-----------------------IAKIF--SIIYAP-- 40

  Fly    80 VVGCVLSLISAWMFACIGLYGMTLDDLKAKPLTGWRKQMQYMTACGMRMVYTFGSFHYVTMKGRA 144
             ||.::.||..:    :|.:...:..|..|........::.|  |.:..:....|.|        
 Worm    41 -VGLIILLIRVF----LGFHTFIVACLLRKSAALRMHTLRIM--CSILGIVVEKSGH-------- 90

  Fly   145 ATAKEAPILVVAPHSSYVDSILVVASGP---PSIVAKRETADIPLLGKIINYAQPIYVQREDPNS 206
              ..|:..::.|.|.|.:|.:.|....|   ||:      .|||   .||.:... ||.......
 Worm    91 --RDESARVLCANHVSILDHLAVDILTPCLLPSV------WDIP---SIIRWCFG-YVDLGATRG 143

  Fly   207 RQNTIRDIVDRARS--TDDWPQVVIFAEGTCTN-RTALIKFKPGAFYPGVPVQPVLLK----YPN 264
            |.    .:|.||:.  |.:...::.|.||..|: ..|||||....|.....||||.::    ||.
 Worm   144 RD----QLVSRAKQLLTREQMPLLAFPEGIITSGEKALIKFNTWCFEVSSVVQPVSVRVWRPYPW 204

  Fly   265 KYDTFTWTWDGPGVLRLLWLTMTQFY------NRCEIEYLPVYTPSEDEVADANLYANNVREVMA 323
            |...        .||...|.| ..||      ....:||||.....|:|..:.  :...|.|.:|
 Worm   205 KVSV--------SVLGSSWWT-DLFYFFALPFTVITVEYLPKMERRENESLEE--FTARVAETLA 258

  Fly   324 KALGVPTSDYSFEDV----------------IVMSRARDMKIPFPGDIVE----IERTIEKLGLN 368
            ..|.:..|.:...|.                :|:......::..|..:.|    |:::.....|:
 Worm   259 GNLKIAVSKFGISDATEAAKRLRTDRERAKKVVVREKTSPRLADPRQMDECAMRIKQSFPSFHLS 323

  Fly   369 ESQRDAELCKGFLRLSNTDRLDIITFGEL 397
            ..:||.|..:     |.|..::.:..|::
 Worm   324 AIRRDLEKTR-----SQTTTVNNLKAGKI 347

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
LPCATNP_001036265.1 PlsC 87..>265 CDD:223282 46/187 (25%)
LPLAT_LPCAT1-like 126..338 CDD:153253 57/227 (25%)
EF-hand_8 455..507 CDD:290545
F44B9.5NP_498746.1 LPLAT 75..279 CDD:302626 60/240 (25%)
CUE 305..346 CDD:214715 8/45 (18%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0204
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.810

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