DRSC/TRiP Functional Genomics Resources

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Protein Alignment LPCAT and GPAT4

DIOPT Version :9

Sequence 1:NP_001036265.1 Gene:LPCAT / 31899 FlyBaseID:FBgn0052699 Length:533 Species:Drosophila melanogaster
Sequence 2:NP_001350126.1 Gene:GPAT4 / 137964 HGNCID:20880 Length:456 Species:Homo sapiens


Alignment Length:316 Identity:79/316 - (25%)
Similarity:138/316 - (43%) Gaps:49/316 - (15%)


- Green bases have known domain annotations that are detailed below.


  Fly    32 LTKRDSEE--DTW---ASKGYN--YINPFVHRIEIDSHIEVAKIYVLTVL-----LLPIRVVGCV 84
            :|||.|.|  ::|   :...||  ||:           :.:..::.|.||     |||:|:    
Human   131 VTKRFSAEELESWNLLSRTNYNFQYIS-----------LRLTVLWGLGVLIRYCFLLPLRI---- 180

  Fly    85 LSLISAWMFACIGL--YGMT----LDDLKAKPLTGWRKQMQYMTACGMRMVYTFGSFHYVTMKGR 143
                 |..|..|.|  .|.|    |.:.:.|........:.....| :|.:....::|....:.|
Human   181 -----ALAFTGISLLVVGTTVVGYLPNGRFKEFMSKHVHLMCYRIC-VRALTAIITYHDRENRPR 239

  Fly   144 AATAKEAPILVVAPHSSYVDSILVVASGPPSIVAKRETADIPLLGKIINYAQP-IYVQREDPNSR 207
            ...      :.||.|:|.:|.|::.:.|..::|.:.....:.::.:.:..|.| ::.:|.:...|
Human   240 NGG------ICVANHTSPIDVIILASDGYYAMVGQVHGGLMGVIQRAMVKACPHVWFERSEVKDR 298

  Fly   208 QNTIRDIVDRARSTDDWPQVVIFAEGTCTNRTALIKFKPGAFYPGVPVQPVLLKYPNKYDTFTWT 272
            ....:.:.:..:.....| ::||.||||.|.|:::.||.|:|..|..|.||.:||..::....|.
Human   299 HLVAKRLTEHVQDKSKLP-ILIFPEGTCINNTSVMMFKKGSFEIGATVYPVAIKYDPQFGDAFWN 362

  Fly   273 WDGPGVLRLLWLTMTQFYNRCEIEYLPVYTPSEDEVADANLYANNVREVMAKALGV 328
            ....|::..|...||.:...|.:.|||..|...||  ||..:||.|:..:|:..|:
Human   363 SSKYGMVTYLLRMMTSWAIVCSVWYLPPMTREADE--DAVQFANRVKSAIARQGGL 416

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
LPCATNP_001036265.1 PlsC 87..>265 CDD:223282 43/184 (23%)
LPLAT_LPCAT1-like 126..338 CDD:153253 53/204 (26%)
EF-hand_8 455..507 CDD:290545
GPAT4NP_001350126.1 LPLAT_LPCAT1-like 218..427 CDD:153253 54/209 (26%)
HXXXXD motif. /evidence=ECO:0000250|UniProtKB:Q9D517 248..253 2/4 (50%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0204
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
21.810

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