DRSC/TRiP Functional Genomics Resources

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Protein Alignment LPCAT and Aup1

DIOPT Version :9

Sequence 1:NP_001036265.1 Gene:LPCAT / 31899 FlyBaseID:FBgn0052699 Length:533 Species:Drosophila melanogaster
Sequence 2:NP_031543.3 Gene:Aup1 / 11993 MGIID:107789 Length:410 Species:Mus musculus


Alignment Length:380 Identity:80/380 - (21%)
Similarity:140/380 - (36%) Gaps:98/380 - (25%)


- Green bases have known domain annotations that are detailed below.


  Fly    60 DSHIEVAKIYVLTVLLLPIRVVGCVLSL-----ISAWMFACIGLYGMTLDDLKAKPLTGWRKQMQ 119
            |||...:..::|..|||...|..|:|.|     :..::.:|            |.|.:..|: ..
Mouse    14 DSHRLPSDGFLLLALLLYAPVGLCLLVLRLFLGLHVFLVSC------------ALPDSVLRR-FV 65

  Fly   120 YMTACGMRMVYTFGSFHYVTMKGRAATAKEAPI------LVVAPHSSYVDSILVVASGPPSIVAK 178
            ..|.|              .:.|..|..:::.:      ::::.|.:..|.         :||..
Mouse    66 VRTMC--------------AVLGLVARQEDSGLRDHRVRVLISNHVTPFDH---------NIVNL 107

  Fly   179 RETADIPLLGKIINYAQPIYVQRE----DPNSRQNTIRDIVDRARSTDDWP-QVVIFAEGTCTN- 237
            ..|...|||.     :.|.:|...    :.:.|...:..:.....||...| .:::|.|...|| 
Mouse   108 LTTCSTPLLN-----SPPSFVCWSRGFMEMDRRVELVESLKKFCASTRLPPTPLLLFPEEEATNG 167

  Fly   238 RTALIKFKPGAFYPGVPVQPVLLKYPNKYDTFTWTWDGPGVLRLLWLTMTQF--YNRCEIEYL-P 299
            |..|::|....|.....|||:.|:......:.|.: |...|..|||.....|  |   ::.:| |
Mouse   168 REGLLRFSSWPFSIQDVVQPLTLQVQRPLVSVTVS-DASWVSELLWSLFVPFTVY---QVRWLHP 228

  Fly   300 VYTPSEDEVADANLYANNVREVMAKALG-VPTSDYSFEDVIVMSRARDMKI------------PF 351
            :.....:|..:   :|..|::::||.|| :.|.....:....|.|.|..::            |.
Mouse   229 IRRQLGEESEE---FALRVQQLVAKELGQIGTRLTPADKAEHMKRQRHPRLRPQSVQSSFPSPPS 290

  Fly   352 PGDIVE-------IERTIEKLGLNESQRDAELCKGFLRLSNTDRLDIITFGELLQ 399
            |...|:       ::..:..:.||..|||         |:.|..:| :|...||:
Mouse   291 PSSDVQLTTLAHRVKEVLPHVPLNVIQRD---------LARTGCVD-LTITNLLE 335

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
LPCATNP_001036265.1 PlsC 87..>265 CDD:223282 35/194 (18%)
LPLAT_LPCAT1-like 126..338 CDD:153253 46/227 (20%)
EF-hand_8 455..507 CDD:290545
Aup1NP_031543.3 LPLAT 66..264 CDD:418432 48/232 (21%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 258..295 5/36 (14%)
CUE_AUP1 296..340 CDD:270603 11/50 (22%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 344..369
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0204
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.900

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