DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG31832 and CG5550

DIOPT Version :10

Sequence 1:NP_723894.2 Gene:CG31832 / 318970 FlyBaseID:FBgn0051832 Length:227 Species:Drosophila melanogaster
Sequence 2:NP_001246376.1 Gene:CG5550 / 36883 FlyBaseID:FBgn0034160 Length:250 Species:Drosophila melanogaster


Alignment Length:254 Identity:98/254 - (38%)
Similarity:141/254 - (55%) Gaps:33/254 - (12%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MKSCFFVLFLWTL-LF-----EVGQS--------SPHTCPSGSP--NGIHQLMLPEE--EPFQVT 47
            ||...|.|.:::| ||     |:|::        ...:|...:|  :|:.::.:..:  |.:   
  Fly     1 MKPICFALCVFSLGLFYLASAEIGENVKIQTYKKYSSSCKELNPKKSGVQKIQVGSDVIEVY--- 62

  Fly    48 QCKTT--ARDWIVIQRRLDGSVNFNQSWFSYKDGFGDPNGEFFIGLQKLYLMTREQPHELFIQLK 110
             |..|  .:.|:|:|||:....||.::|.||:.||||..|.|||||..|..::..||.||:|:|.
  Fly    63 -CDVTIAGKGWLVVQRRVSVEENFYRNWTSYQTGFGDLKGNFFIGLNNLNKISSLQPQELYIELV 126

  Fly   111 HGPGATVYAHFDDFQVDSETELYKLERVGKYSGTAGDSLRYHINKRFSTFDRDNDESSKNCAAEH 175
            ...|...|||:..|.|.:....|.:.::|.|||||||||.||:.:.|||||||||.::.||||.:
  Fly   127 DFAGEKRYAHYSVFHVGNVYSNYPITQLGAYSGTAGDSLSYHLYQPFSTFDRDNDNATINCAARY 191

  Fly   176 GGGWWFHSCLS----SSLNGLYFREGETGML---NGIHWGRWKFQSLTF--VQIMIRPK 225
            .|.||:..|||    |:|||.|.....|...   :||.||.||..:.::  |.||:|||
  Fly   192 MGAWWYRECLSRIPCSNLNGAYLGGNHTDPALFGSGIVWGEWKGFTYSYKTVNIMVRPK 250

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG31832NP_723894.2 FReD 28..225 CDD:238040 86/211 (41%)
CG5550NP_001246376.1 FReD 34..250 CDD:238040 87/219 (40%)

Return to query results.
Submit another query.