DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG31832 and sca

DIOPT Version :9

Sequence 1:NP_723894.2 Gene:CG31832 / 318970 FlyBaseID:FBgn0051832 Length:227 Species:Drosophila melanogaster
Sequence 2:NP_476710.2 Gene:sca / 36411 FlyBaseID:FBgn0003326 Length:799 Species:Drosophila melanogaster


Alignment Length:176 Identity:68/176 - (38%)
Similarity:97/176 - (55%) Gaps:9/176 - (5%)


- Green bases have known domain annotations that are detailed below.


  Fly    22 PHTCPS--GSPNGIHQLMLP--EEEPFQVTQCKTTARDWIVIQRRLDGSVNFNQSWFSYKDGFGD 82
            ||.|..  ...:|:| |:.|  :..|. :|.|  ||..|..:|||.|||.:||:||..|..|||.
  Fly   539 PHDCSEVHTQTDGLH-LIAPAGQRHPL-MTHC--TADGWTTVQRRFDGSADFNRSWADYAQGFGA 599

  Fly    83 PNGEFFIGLQKLYLMTREQPHELFIQLKHGPGATVYAHFDDFQVDSETELYKLERVGKYSGTAGD 147
            |.|||:||.::|:.:|.:....|.:|::........|.:..|.:.|..:.|:| .:.:|||.|.|
  Fly   600 PGGEFWIGNEQLHHLTLDNCSRLQVQMQDIYDNVWVAEYKRFYISSRADGYRL-HIAEYSGNASD 663

  Fly   148 SLRYHINKRFSTFDRDNDESSKNCAAEHGGGWWFHSCLSSSLNGLY 193
            :|.|....:||..|.|.|.|..:|||.:.|||||..|..::|||.|
  Fly   664 ALNYQQGMQFSAIDDDRDISQTHCAANYEGGWWFSHCQHANLNGRY 709

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG31832NP_723894.2 FReD 28..225 CDD:238040 65/168 (39%)
scaNP_476710.2 PRK13923 <200..300 CDD:276343
FBG 538..736 CDD:214548 68/176 (39%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG2579
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 1 1.000 - - otm14151
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR19143
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
43.910

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