DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG31832 and Fcna

DIOPT Version :9

Sequence 1:NP_723894.2 Gene:CG31832 / 318970 FlyBaseID:FBgn0051832 Length:227 Species:Drosophila melanogaster
Sequence 2:NP_032021.1 Gene:Fcna / 14133 MGIID:1340905 Length:334 Species:Mus musculus


Alignment Length:204 Identity:82/204 - (40%)
Similarity:110/204 - (53%) Gaps:12/204 - (5%)


- Green bases have known domain annotations that are detailed below.


  Fly    16 EVG----QSSPHTCPSGSPNGI-----HQLMLPEEEPFQV-TQCKTTARDWIVIQRRLDGSVNFN 70
            |:|    |..|.:|......||     :.:.||:..|..| .........|.|.|||:|||::|.
Mouse   113 ELGDTLCQRGPRSCKDLLTRGIFLTGWYTIHLPDCRPLTVLCDMDVDGGGWTVFQRRVDGSIDFF 177

  Fly    71 QSWFSYKDGFGDPNGEFFIGLQKLYLMTREQPHELFIQLKHGPGATVYAHFDDFQVDSETELYKL 135
            :.|.|||.|||:...||::|...|:|:|.....||.:.|:...|...||.:..|||..|.|.|||
Mouse   178 RDWDSYKRGFGNLGTEFWLGNDYLHLLTANGNQELRVDLQDFQGKGSYAKYSSFQVSEEQEKYKL 242

  Fly   136 ERVGKY-SGTAGDSLRYHINKRFSTFDRDNDESSKNCAAEHGGGWWFHSCLSSSLNGLYFREGET 199
             .:|:: .|||||||..|.|..|:|.|:|||.:|.||||...|.||:|:|..|:|||.|......
Mouse   243 -TLGQFLEGTAGDSLTKHNNMSFTTHDQDNDANSMNCAALFHGAWWYHNCHQSNLNGRYLSGSHE 306

  Fly   200 GMLNGIHWG 208
            ...:||:||
Mouse   307 SYADGINWG 315

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG31832NP_723894.2 FReD 28..225 CDD:238040 77/188 (41%)
FcnaNP_032021.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 47..117 2/3 (67%)
Collagen 65..106 CDD:189968
FReD 123..332 CDD:238040 79/194 (41%)
A domain, contributes to trimerization. /evidence=ECO:0000250 123..162 8/38 (21%)
B domain, contributes to trimerization. /evidence=ECO:0000250 163..251 37/88 (42%)
Carbohydrate-binding. /evidence=ECO:0000250|UniProtKB:O00602 290..292 0/1 (0%)
P domain. /evidence=ECO:0000250|UniProtKB:O00602 325..334
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG2579
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0000029
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X25
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
54.810

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