DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG31832 and Tnc

DIOPT Version :9

Sequence 1:NP_723894.2 Gene:CG31832 / 318970 FlyBaseID:FBgn0051832 Length:227 Species:Drosophila melanogaster
Sequence 2:XP_008761976.1 Gene:Tnc / 116640 RGDID:621057 Length:2202 Species:Rattus norvegicus


Alignment Length:221 Identity:77/221 - (34%)
Similarity:115/221 - (52%) Gaps:25/221 - (11%)


- Green bases have known domain annotations that are detailed below.


  Fly    22 PHTCPSGSPN-----GIHQLMLPEEEPFQVTQ-----CKTTA--RDWIVIQRRLDGSVNFNQSWF 74
            |..|.....|     |::.:.:..::    ||     |..|:  ..|||..||.:|..:|.::|.
  Rat  1982 PRDCSQAMLNGDTTSGLYTIYINGDK----TQALEVYCDMTSDGGGWIVFLRRKNGREDFYRNWK 2042

  Fly    75 SYKDGFGDPNGEFFIGLQKLYLMTREQPHELFIQLK-HGPGATVYAHFDDFQVDSETELYKLERV 138
            :|..||||...||::||..|..:|.:..:||.:.|: ||..|  ||.:|.|.|......||| :|
  Rat  2043 AYAAGFGDRREEFWLGLDNLSKITAQGQYELRVDLQDHGESA--YAVYDRFSVGDAKSRYKL-KV 2104

  Fly   139 GKYSGTAGDSLRYHINKRFSTFDRDNDESSKNCAAEHGGGWWFHSCLSSSLNGLYFREGETGMLN 203
            ..||||||||:.||..:.|||:|:|.|.:..|||..:.|.:|:.:|...:|.|.|   |:.....
  Rat  2105 EGYSGTAGDSMNYHNGRSFSTYDKDTDSAITNCALSYKGAFWYKNCHRVNLMGRY---GDNNHSQ 2166

  Fly   204 GIHWGRWKFQ--SLTFVQIMIRPKYF 227
            |::|..||..  |:.|.::.:||..|
  Rat  2167 GVNWFHWKGHEYSIQFAEMKLRPSNF 2192

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG31832NP_723894.2 FReD 28..225 CDD:238040 73/211 (35%)
TncXP_008761976.1 EGF_2 346..372 CDD:285248
EGF_2 377..403 CDD:285248
EGF_2 408..434 CDD:285248
EGF_2 434..465 CDD:285248
EGF_2 468..496 CDD:285248
EGF_2 504..527 CDD:285248
EGF_2 533..558 CDD:285248
EGF_2 592..620 CDD:285248
FN3 624..710 CDD:238020
fn3 713..793 CDD:278470
FN3 804..891 CDD:238020
fn3 894..976 CDD:278470
fn3 986..1064 CDD:278470
fn3 1075..1154 CDD:278470
fn3 1166..1241 CDD:278470
fn3 1257..1336 CDD:278470
fn3 1348..1417 CDD:278470
fn3 1444..1509 CDD:278470
fn3 1534..1606 CDD:278470
fn3 1622..1702 CDD:278470
FN3 1712..1798 CDD:238020
fn3 1801..1874 CDD:278470
fn3 1889..1961 CDD:278470
Fibrinogen_C 1981..2190 CDD:278572 75/217 (35%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
21.910

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