Protein Alignment RpS28b and rps-28

DIOPT Version :9

• Sequence 1: NP_001285059.1
• Gene: RpS28b / 31897
• FlyBaseID: FBgn0030136
• Length: 65
• Species: Drosophila melanogaster
• Sequence 2: NP_001370541.1
• Gene: rps-28 / 176975
• WormBaseID: WBGene00004497
• Length: 65
• Species: Caenorhabditis elegans
• Alignment Length: 66
• Identity: 54/66 - (81%)
• Similarity: 59/66 - (89%)
• Gaps: 2/66 - (3%)

  Fly     1 MDKPVVWARVMKVLGRTGSQGQCTQVKVEFLGEQ-NRQIIRNVKGPVREGDILTLLESEREARRL 64
            ||| :..|||.||:||||||||||||:|||:.:| ||.|||||||||||||||||||||||||||
 Worm     1 MDK-LTLARVTKVIGRTGSQGQCTQVRVEFINDQNNRSIIRNVKGPVREGDILTLLESEREARRL 64

  Fly    65 R 65
            |
 Worm    65 R 65

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
RpS28b	NP_001285059.1	S1_S28E	8..65	CDD:239904	49/57 (86%)
rps-28	NP_001370541.1	S1_S28E	5..65	CDD:239904	49/59 (83%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	1	0.930	-	-		C160167695
Domainoid	1	1.000	98	1.000	Domainoid score	I4498
eggNOG	1	0.900	-	-		E1_COG2053
Hieranoid	1	1.000	-	-
Homologene	1	1.000	-	-		H68150
Inparanoid	1	1.050	101	1.000	Inparanoid score	I3565
Isobase	0	0.000	Not matched by this tool.
OMA	1	1.010	-	-		QHG53935
OrthoDB	1	1.010	-	-		D1578965at2759
OrthoFinder	1	1.000	-	-		FOG0002156
OrthoInspector	1	1.000	-	-		otm14203
orthoMCL	1	0.900	-	-		OOG6_101185
Panther	1	1.100	-	-	LDO	PTHR10769
Phylome	1	0.910	-	-
RoundUp	1	1.030	-	avgDist	Average_Evolutionary_Distance	R1243
SonicParanoid	1	1.000	-	-		X1439
SwiftOrtho	1	1.000	-	-
TreeFam	0	0.000	Not matched by this tool.
	16	15.840