DRSC/TRiP Functional Genomics Resources

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Protein Alignment RpS28b and rps-28

DIOPT Version :10

Sequence 1:NP_572568.1 Gene:RpS28b / 31897 FlyBaseID:FBgn0030136 Length:65 Species:Drosophila melanogaster
Sequence 2:NP_001370541.1 Gene:rps-28 / 176975 WormBaseID:WBGene00004497 Length:65 Species:Caenorhabditis elegans


Alignment Length:66 Identity:54/66 - (81%)
Similarity:59/66 - (89%) Gaps:2/66 - (3%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MDKPVVWARVMKVLGRTGSQGQCTQVKVEFLGEQ-NRQIIRNVKGPVREGDILTLLESEREARRL 64
            ||| :..|||.||:||||||||||||:|||:.:| ||.|||||||||||||||||||||||||||
 Worm     1 MDK-LTLARVTKVIGRTGSQGQCTQVRVEFINDQNNRSIIRNVKGPVREGDILTLLESEREARRL 64

  Fly    65 R 65
            |
 Worm    65 R 65

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
RpS28bNP_572568.1 S1_S28E 8..65 CDD:239904 49/57 (86%)
rps-28NP_001370541.1 S1_S28E 5..65 CDD:239904 49/59 (83%)

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