DRSC/TRiP Functional Genomics Resources

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Protein Alignment DIP-kappa and opcml

DIOPT Version :10

Sequence 1:NP_723828.1 Gene:DIP-kappa / 318958 FlyBaseID:FBgn0051814 Length:672 Species:Drosophila melanogaster
Sequence 2:NP_001072487.1 Gene:opcml / 779942 XenbaseID:XB-GENE-5831850 Length:346 Species:Xenopus tropicalis


Alignment Length:374 Identity:112/374 - (29%)
Similarity:163/374 - (43%) Gaps:71/374 - (18%)


- Green bases have known domain annotations that are detailed below.


  Fly    37 AAVTMLMTATPTLAEIPSKGKHTRLDTQQTAQEDSDFPRFAEPIANVTVSVGRDALMACVVENLK 101
            ||:|:|::.|    .:|.:            ..|:.||:..:   ||||..|..|::.|.|:| :
 Frog    20 AALTVLLSIT----GVPVR------------SGDAGFPKAMD---NVTVRQGDSAILRCTVDN-R 64

  Fly   102 GYKVAWVRVDTQTILSIHHNVISQNSRISLTYNDHRSWYLHIKEVEETDRGWYMCQVNTD--PMR 164
            ..:|||  ::..|||...::..|.:.|:.|..|....:.:.|:.|:..|.|.|.|.|.||  |..
 Frog    65 VTRVAW--LNRSTILYTGNDKWSIDPRVVLLANTKSQYSIEIQNVDIYDEGPYTCSVQTDNHPKT 127

  Fly   165 SRKGYLQVVVPPIIVEGLTSNDMVVREGQNISLVCKARGYPEPYVMWRREDGEEMLIGGEHVNVV 229
            ||...:..|.|.|:   ..|:|:.|.||..::|.|.|.|.|||.|.||.      ..|..|..|.
 Frog   128 SRVHLIVQVAPQIL---NISSDITVNEGSTVALRCLATGRPEPAVTWRH------FTGKSHRFVS 183

  Fly   230 DGELLHITKVSRLHMAAYLCVASNGVPPSISKRVHLRVQFPPMLSIPNQLEGAYLGQDVILECHT 294
            |.|.|.||.::|.....|.|.|:|.|.....::|.:.|.:||.:| ..:..||.|||..||.|..
 Frog   184 DDEYLEITGITRDQSGQYECSAANDVSAPDIRKVRVTVNYPPYIS-DTRNTGASLGQKGILRCSA 247

  Fly   295 EAYPASINYWTTERGDMIISDTSRA----GDKYETTSTVSGYTKYMKLKIRAVGPNDFGTYRCVA 355
            .|.|.:...|..|       :|..|    |.:.|....:|..|.:      .|...|:|.|.|||
 Frog   248 SAVPLAEFQWYRE-------ETRLANGLDGVRIENKDHMSILTFF------NVSEKDYGNYTCVA 299

  Fly   356 KNSLGETDGNIKLDEMPTPTTAIISEMSLLNRSYDGKRRHRNKFDSANA 404
            .|.||.::.::.|                    |.|.....|:..||:|
 Frog   300 SNKLGNSNASVIL--------------------YAGPGAIHNRSSSASA 328

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
DIP-kappaNP_723828.1 IG_like 82..174 CDD:214653 31/93 (33%)
Ig strand B 91..95 CDD:409353 1/3 (33%)
Ig strand C 104..108 CDD:409353 2/3 (67%)
Ig strand E 139..143 CDD:409353 0/3 (0%)
Ig strand F 153..158 CDD:409353 2/4 (50%)
Ig strand G 165..168 CDD:409353 2/2 (100%)
Ig 176..267 CDD:472250 31/90 (34%)
Ig strand B 195..199 CDD:409301 1/3 (33%)
Ig strand C 208..212 CDD:409301 1/3 (33%)
Ig strand E 232..236 CDD:409301 2/3 (67%)
Ig strand F 246..251 CDD:409301 2/4 (50%)
Ig strand G 260..263 CDD:409301 0/2 (0%)
IG_like 282..368 CDD:214653 27/89 (30%)
Ig strand B 288..292 CDD:409353 2/3 (67%)
Ig strand C 301..305 CDD:409353 0/3 (0%)
Ig strand E 330..340 CDD:409353 2/9 (22%)
Ig strand F 350..355 CDD:409353 2/4 (50%)
Ig strand G 363..366 CDD:409353 0/2 (0%)
opcmlNP_001072487.1 Ig 46..134 CDD:472250 31/90 (34%)
Ig strand B 55..59 CDD:409353 1/3 (33%)
Ig strand C 67..71 CDD:409353 3/5 (60%)
Ig strand E 100..104 CDD:409353 0/3 (0%)
Ig strand F 114..119 CDD:409353 2/4 (50%)
Ig strand G 127..130 CDD:409353 1/2 (50%)
Ig_3 138..207 CDD:464046 29/77 (38%)
Ig_3 224..301 CDD:464046 28/90 (31%)

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