DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment DIP-kappa and zgc:152904

DIOPT Version :9

Sequence 1:NP_723828.1 Gene:DIP-kappa / 318958 FlyBaseID:FBgn0051814 Length:672 Species:Drosophila melanogaster
Sequence 2:NP_001070212.1 Gene:zgc:152904 / 767777 ZFINID:ZDB-GENE-060929-856 Length:809 Species:Danio rerio


Alignment Length:500 Identity:108/500 - (21%)
Similarity:177/500 - (35%) Gaps:127/500 - (25%)


- Green bases have known domain annotations that are detailed below.


  Fly    82 NVTVSVGRDALMACVVENLKGYKVAW------VRVDTQTILSIHHNVISQNSRISLTYNDHRSWY 140
            |.|..........||.......:|.|      :....|.:|:              |.|..:| .
Zfish   188 NATADYQESVTFTCVTSGSPDPQVTWYWKGHAIEHSEQYVLN--------------TMNGGKS-T 237

  Fly   141 LHIKEVEETDRGWYMCQVNTDPMRSRKG-YLQVVVPPIIVEGLTSNDMVVREGQNISLVCKARGY 204
            |.:|.:::||.|.|||:.:.....|... :|:|.|.|.|.:   ..::...||....:.|.|.|.
Zfish   238 LTVKNIKQTDGGPYMCRASNKAGSSESQLFLKVFVQPHITQ---LRNVTAVEGSAAMISCTAEGE 299

  Fly   205 PEPYVMWRR-------EDGEEMLIGGEHVNVVDGE-LLHITKVSRLHMAAYLCVASNGVPPSISK 261
            |.|.:.|||       .|||:...|...|....|: :|.|:.|.......:.|.|.:.: ....|
Zfish   300 PLPEISWRRASDGHSFTDGEKSKDGRVEVRGRHGKSMLTISGVQLSDWGRFDCEALSRI-GGHQK 363

  Fly   262 RVHLRVQFPPMLSIPNQLEGAYLGQDVILECHTEAYPASINYWTTERGDMIISDTSRAGDKYETT 326
            .:.|.:::.|.......:..::.|..|.:.|..::.||:...|..||  ..||....:..:..:|
Zfish   364 SMFLDI
EYAPKFQTNQSIFYSWEGNPVNISCEVKSNPAATMLWRRER--FTISSQGTSNIRIHST 426

  Fly   327 STVSGYTKYMKLKIRAVGPNDFGTYRCVAKNSLGETDGNIKLDEMPTPT-------TAIISEMSL 384
            ...|      .|::..|...|||.|.|.|:|::|.......|.:...|:       ||:...|:.
Zfish   427 DGRS------LLEVTPVSDRDFGRYNCTARNNIGARYQEFILAQADVPSSPYSVRMTAVSQRMAT 485

  Fly   385 LNRSYDGKRRHRNKFDSANALP------DY----GVEEWRD----GAQ----------------- 418
            ::..         |.||...:|      :|    ..:|||.    |.|                 
Zfish   486 VSFM---------KPDSHGGVPISFYIINYRDTSSAQEWRSARTHGVQTAVVLTSLEPNTTYEVR 541

  Fly   419 -------GNNAGNNGDNNQT-PVRNP-PGAFHNSAGSLAQHNLLAKIMLGIKTQSFGIFKRLSSS 474
                   |....::.::.|| |:|.| |...|...|            :| |....|:.|:....
Zfish   542 VSAVNGKGQGEFSHTESFQTLPIREPSPPTVHGQRG------------VG-KAYRLGLVKQDDGG 593

  Fly   475 LPLA-------AGQSFLWLSTL-------SLVSAPSRWRMS-NVE 504
            :|:.       ..:...|::.|       :|:. |.:|... |||
Zfish   594 MPIVEYILKYKTDKEEQWMTKLVPGMNDFALLQ-PLQWNTRYNVE 637

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
DIP-kappaNP_723828.1 Ig 80..172 CDD:299845 21/96 (22%)
IG_like 82..174 CDD:214653 22/98 (22%)
IG_like 184..267 CDD:214653 23/90 (26%)
IGc2 191..255 CDD:197706 21/71 (30%)
IG_like 282..368 CDD:214653 22/85 (26%)
Ig 288..367 CDD:143165 21/78 (27%)
zgc:152904NP_001070212.1 Ig 1..81 CDD:299845
IG_like 2..80 CDD:214653
IGc2 97..158 CDD:197706
Ig 177..273 CDD:299845 22/99 (22%)
I-set 184..270 CDD:254352 21/96 (22%)
Ig 272..369 CDD:299845 26/100 (26%)
I-set 274..367 CDD:254352 24/96 (25%)
IG_like 385..462 CDD:214653 22/84 (26%)
IGc2 386..454 CDD:197706 21/75 (28%)
FN3 468..561 CDD:238020 15/101 (15%)
fn3 <591..650 CDD:278470 8/47 (17%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR12231
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
22.010

Return to query results.
Submit another query.