DRSC/TRiP Functional Genomics Resources

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Protein Alignment DIP-kappa and lsamp

DIOPT Version :9

Sequence 1:NP_723828.1 Gene:DIP-kappa / 318958 FlyBaseID:FBgn0051814 Length:672 Species:Drosophila melanogaster
Sequence 2:NP_001034921.1 Gene:lsamp / 664692 ZFINID:ZDB-GENE-090108-1 Length:333 Species:Danio rerio


Alignment Length:290 Identity:90/290 - (31%)
Similarity:131/290 - (45%) Gaps:28/290 - (9%)


- Green bases have known domain annotations that are detailed below.


  Fly    82 NVTVSVGRDALMACVVENLKGYKVAWVRVDTQTILSIHHNVISQNSRISLTYNDHRSWYLHIKEV 146
            |:|:..|...::.|.|:: |..||||  ::...|:....:..|.:.|:.|.......:.|.|::|
Zfish    36 NITIRQGDTTVIRCYVDD-KVSKVAW--LNRSNIIFAGEDKWSLDPRVELVTQGQLEYSLRIQKV 97

  Fly   147 EETDRGWYMCQVNT-DPMRSRKGYLQVVVPPIIVEGLTSNDMVVREGQNISLVCKARGYPEPYVM 210
            :..|.|.|.|.:.| ...::.:.||.|.||.||.:  .|.|:.|.||.|::|.|.|.|.|:|.:.
Zfish    98 DVFDEGPYTCSIQTKQQSKTSQVYLIV
QVPAIIYK--VSEDITVNEGSNVALTCLANGRPDPAIT 160

  Fly   211 WRREDGEEMLI--GGEHVNVVDGELLHITKVSRLHMAAYLCVASNGVPPSISKRVHLRVQFPPML 273
            ||       |:  ..|.::|  ||.|.|:.|.|.....|.|.|||.|.....|.|::.|.:||.:
Zfish   161 WR-------LLNPSAEALDV--GEYLEISGVVRSQAGRYECKASNDVSTPDVKYVNVVVNYPPYI 216

  Fly   274 SIPNQLEGAYLGQDVILECHTEAYPASINYWTTERGDMIISDTSRAGDKYETTSTVSGYTKYMKL 338
            ......|.| :||..:|.|...|.|.....|        ..|..|.......|..|||  ....|
Zfish   217 KDVRSSETA-VGQAGVLHCEASAVPQPEFEW--------YRDERRLSSSQSLTIQVSG--SRTVL 270

  Fly   339 KIRAVGPNDFGTYRCVAKNSLGETDGNIKL 368
            .:..|...|:|.|.|||.|.||..:.::.|
Zfish   271 VVANVTEEDYGNYTCVATNRLGVHNASVFL 300

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
DIP-kappaNP_723828.1 Ig 80..172 CDD:299845 24/90 (27%)
IG_like 82..174 CDD:214653 25/92 (27%)
IG_like 184..267 CDD:214653 31/84 (37%)
IGc2 191..255 CDD:197706 25/65 (38%)
IG_like 282..368 CDD:214653 25/85 (29%)
Ig 288..367 CDD:143165 22/78 (28%)
lsampNP_001034921.1 Ig 34..124 CDD:299845 24/90 (27%)
IG_like 36..124 CDD:214653 24/90 (27%)
IG_like 134..197 CDD:214653 27/71 (38%)
IGc2 141..199 CDD:197706 25/66 (38%)
I-set 213..300 CDD:254352 28/97 (29%)
Ig 231..298 CDD:143165 22/76 (29%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D265311at33208
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
11.010

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